Sordaria macrospora: SMAC_02512
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Entry
SMAC_02512 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
smp
Sordaria macrospora
Pathway
smp03022
Basal transcription factors
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SMAC_02512
09124 Replication and repair
03420 Nucleotide excision repair
SMAC_02512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
SMAC_02512
03400 DNA repair and recombination proteins [BR:
smp03400
]
SMAC_02512
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SMAC_02512
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SMAC_02512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
10808398
NCBI-ProteinID:
XP_003350843
UniProt:
F7VPT1
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MADSDGEYASDDELKRNGKRTADGRSKQTKASWEDVKRSWDTVLETADSGLSIAEIREAE
KRRRLLRDTTPLQRGIIRHLMLVLDMSFAMADKDLLPNRYRVVLNNAIGFVREYFEQNPI
SQLGIVGMRDGIAVRISDLSGNPAEHIEKLMQWSEQQDPQGNSSLQNALQMCRGALYQTP
SHATREVLIIYGALVSIDPGDIHDTINDLVADRIRVSVVGLAGQVAICTELCKRTNNHDG
NYSVAIDEVHLKELFFAATTPPVTRTPEQNTASLLMMGFPSRTLAPKDHVSYCACHAKPT
REGYTCPRCGIKVCRLPIDCPICKLTLIQSTHLARSYHHLFPLKVFVEVPWSQASRSTAC
YSCLSPFPTGPRDTVAAAPAVLGGRAGKGGKQDSDPKNPKPELKGVSESGRYACQVCGNH
FCIDCDVFAHETIHNCPGCQSDTREPERDTALAVPDGGPMPMVVDS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcggatggcgagtatgcctccgacgatgagctcaagaggaacggaaagagg
acagcggatgggcgcagcaagcaaaccaaggcgtcctgggaagatgtaaagcgctcctgg
gataccgttctcgaaacagcggacagtggtctctcgattgcagagatccgggaggccgag
aagcgacgtcgccttctgcgcgacacgacaccacttcagcgtggcatcatccgccacttg
atgttggtgcttgacatgagttttgccatggccgacaaagatctgctaccaaaccgctat
cgagtcgtcctcaacaacgccattggcttcgtacgcgaatactttgaacagaatcccatc
agtcagttgggcatcgtggggatgcgcgatgggattgccgtgcgcatcagcgacctgagt
gggaacccagccgaacacatcgagaagttgatgcaatggagcgagcaacaagacccccaa
ggaaattcaagtttacaaaatgcactgcaaatgtgcagaggtgctctatatcaaacccca
tcacatgccacgcgcgaagtactgataatctacggggccctcgtctcgatcgacccgggc
gacatccacgacactatcaacgacctggtagccgaccgaatccgcgtctccgtcgtcggc
ctcgccggccaggtcgccatctgcaccgagctctgcaagcgaacaaacaaccacgacggc
aactacagcgtcgccatagacgaggtgcacctgaaggagctcttcttcgccgccaccact
ccgcccgtcacccgcacccccgagcaaaacactgccagcctgctcatgatgggcttcccc
agccgtacgctcgcccccaaagaccacgttagctactgcgcctgtcacgcgaagcccaca
cgagaaggatatacctgtccgcgctgcggaatcaaggtgtgccggctgccgatcgactgt
ccgatctgcaagctcacgctcattcagagtacgcacttggcgaggtcgtaccaccatttg
ttcccgcttaaagtctttgtggaggttccgtggtcacaggcgagtcggtcgacagcgtgc
tactcgtgtctatcgccttttcctacagggccgagggacacggtggcagcggcgccggcg
gttttgggagggagagcagggaaaggcgggaaacaggacagcgatcccaagaatccaaaa
ccggaactcaagggcgtcagtgaaagcggccggtatgcgtgccaggtgtgcgggaaccac
ttctgtatagactgtgatgtctttgcccatgagacgattcataactgcccggggtgtcag
agcgatacgagggagccggaaagggacacggcgctagcagtaccagacggtggtcctatg
cctatggtggtagattcataa
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