Sordaria macrospora: SMAC_08610
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Entry
SMAC_08610 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
smp
Sordaria macrospora
Pathway
smp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMAC_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smp03019
]
SMAC_08610
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SMAC_08610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_8
TPR_22
TPR_17
TPR_14
TPR_1
TPR_11
TPR_12
TPR_6
TPR_7
TPR_9
TPR_MalT
ChAPs
DUF5588
DUF4192
E_motif
Motif
Other DBs
NCBI-GeneID:
10803014
NCBI-ProteinID:
XP_003345659
UniProt:
F7WAD1
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MSTKQLVKAAAEAIKKQQWDDAIEGAKNIIDKDSKSYQGHILLAFALDKKGRLEEAENTY
LAATRLKPEEKEAWQGLVRLYPNLDTTKKFKQHQHAVLKLAEIFRDANDLQKCYETVDSF
ITYARTKAESYQYVDALDLILPESPIYEAIEGRFGHVWRTYETQAQLVEQNEKKRINTLI
GERRTRIGARINEVTLEVKREVYRQSRLSYTYAQLINWTNDDEVRRMYEEKLIQYCHDRL
MAWPPGDEKERELANVLKLANDMVIIKHPYKLAWDIAINWQDHKEIKEWDVTVLRQYCTF
FPDSDLNRVVMGFLTSSVSPFPQEKQEQTAEDVAAKSEGSTEESEDDEDGGAATIYAPIT
EEDRLLMMTEGISGAESLLAFRLMGEYYQYLEEWESNVELMRKALTFLKEERTKTGLDFR
FTEDAFSVYLGTALVFYQTPRNHQEAKALFDAVLAHDPTSTPAMIGVGLIYEEEEEYDEA
IDFLERALKRDPDNIRVRTEAAWVKALKGDFDMARAELDACIPILSRKGQSKELLSQTQY
RLGYCIWNIDTSKAARKDRSGAYAMFLESLKNNLNFAPAYTILGIYYADYAKDKKRARRC
FQKAVELSPSEVESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFA
ALGVAELNKQEFHKAIVSFQSALRISPNDYHSWVGLGEAYHSSGRYIAATKAILNAQNLE
ESSEANLTGETWFTKFILADIKRELGDFDESIELYQHVIHERPDEEGVATALMQTLVDNA
FDSLNKGFFGKAAGLAAETLTFATKAPDAIKETFNYWKAIGDACSLFSNVQGRISEFPAD
TVRSLLGTDDDFPAYQILKDIDNVGTGIVSTDGIFPKDETVGVDLTKALQATILAHKRSI
HIASSDIHAQSVAYYNLGWAEYRAHACLPPDIRKNSHKKPTNYIKAAMACFKRAIELEAG
NSEFWNALGVVTSEVNPAVAQHAFCRSLFLNERGAHVWANLATLALAQGDLALANEAFTR
SQSTDPDYSLAWLGQGVVALLTGNEKDARGLFTHAMEISGDSSRIISQRYAVSMFDYILS
SSSSESLPITTLIQPIFALSQLQSLHSSSASSSSSSDLAYTHLLALFLERTNELSRAISI
LDSLSTTLEQEYESTESPLALKHFAIVKSDLARCQLSAHLFTEAIDSADLALQLSSDDSA
DELTAEERRKLRLSAHVTLGLAKYYSHNIPAAVAAFDQALSESETNPDVACLLAQILWAT
GSEESRERGRDLLFSVIAEASEGEGEGEHEQHVQSVLLLGIIALLDNDSESMDAVVSELQ
SLRSNDEGISPEQHAQLGEVLRAILTALGSGQEQPMVDVMLHPFLPHGWSRVAQLAASLG
DNGGEEEAKEITEAASEMALRVARKGVPPRGNLSPEDLARAYAGTGRPADAQVGCMVAPW
EKRGWESLGDVVAVNVGLKH
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaacagctcgtcaaggcggctgccgaggccatcaagaaacagcagtgggac
gacgccatcgagggcgcaaagaacatcatcgacaaggacagcaagagctaccagggacac
atcctcctggcctttgctctcgacaagaaggggaggttggaggaagcagagaacacatac
ctcgccgccaccagactcaaaccagaagagaaggaggcatggcagggccttgtcaggctg
tatcctaacctcgacaccaccaagaagttcaagcaacaccagcatgccgttctcaagctc
gccgagatattcagagacgcgaacgaccttcaaaaatgttacgagaccgtcgatagcttc
atcacctatgcgcgcaccaaggccgagtcataccaatacgtggacgccctcgacctaata
cttcccgaatctcccatctacgaggccatcgagggtcgctttggccatgtgtggaggaca
tacgagacacaggcccagttggtggagcaaaatgagaagaagcgcatcaacaccttgatc
ggcgagaggaggacgcgaatcggcgcaagaatcaacgaggtcaccctagaggtcaagagg
gaggtctacagacagagcaggttgagctacacctatgcgcagctcatcaactggaccaac
gacgacgaagtgcgccgcatgtacgaggagaagctgatccaatactgccacgaccgactc
atggcctggcctccaggagacgaaaaggaacgagaactggccaatgtcctgaagctcgcc
aacgacatggtcatcatcaagcacccctacaagctggcctgggatatcgcaatcaactgg
caggaccacaaggagatcaaggagtgggacgtcacagtgctgagacagtactgcactttc
ttccccgatagtgatctcaacagggtggtcatgggcttcttgaccagcagcgtgtctccc
ttcccgcaggagaagcaggaacagacagcagaggatgtggcggccaagagcgagggtagc
acggaagagagcgaggacgacgaggacggaggcgcggccacgatctatgctcccatcacc
gaggaagaccgtcttcttatgatgacagagggtatcagcggtgccgagtccttgctggcg
ttcagactaatgggcgaatactaccaatatctggaggagtgggagagcaatgtcgagctg
atgcgcaaggctttgactttcctgaaggaggagcggaccaaaactggtctggatttccgc
tttaccgaggacgccttctccgtgtatctcggcactgctttggtcttttaccagacacct
cgcaaccaccaggaagccaaggctcttttcgatgcggtcctcgctcacgaccctacctcc
acacctgccatgattggtgttggtctcatctacgaggaggaggaggagtacgatgaagct
attgacttcctcgagcgggctctgaagcgtgaccccgataatatccgtgtcaggacagag
gccgcttgggtcaaggcacttaaaggagactttgacatggctagggccgagcttgacgct
tgcatccccatcctctccaggaagggacagtccaaggaactcctatcacagactcagtac
cgtcttggttattgtatctggaacattgacacctccaaggctgcccgaaaggaccggtct
ggagcttacgccatgttccttgagtcactcaagaacaacctcaacttcgcccctgcttac
acaatcctcggtatctactacgccgactacgccaaggacaagaagagagcgcgcaggtgt
tttcaaaaggccgtggagctttcgccatccgaggtcgagtctgctgaacggctagctagg
tcctttgccgatgacggagactgggaccgcgtcgagctcgtagcccaaagagttgtcgat
tctggcaaagtcaagccaccacctggctctaagcgcaagggtataagctggcctttcgct
gccctcggtgtggccgagctcaacaagcaagagttccacaaggctatcgtgtccttccag
tcggctctgcgcatttctcccaatgattaccattcctgggtaggtttgggtgaggcatac
cacagctctggtcgctatatcgccgccaccaaggctatcctgaatgcccagaacctagag
gaatcttcggaggcaaatctcaccggagagacgtggttcacaaagttcattctggccgac
atcaagcgcgagctgggtgactttgatgagtccattgagctttatcagcatgtcattcat
gaacgccctgacgaagaaggtgtcgccactgccttgatgcaaacacttgtcgacaacgcc
tttgacagtctcaacaagggcttctttggcaaggctgccggtctggctgccgagacactc
accttcgccaccaaggctcccgatgccatcaaggagactttcaattattggaaggccatc
ggtgatgcttgctcgctcttttccaacgtccaaggccgcatctccgagttccccgccgac
actgtccgctcgctccttggtaccgacgatgacttccctgcctaccaaatcctcaaggac
attgacaacgtcggcaccggcatcgtctccaccgacggcattttccccaaggacgaaaca
gtcggcgtagacttgacgaaagccctccaggccaccatcctcgcccacaagcgctccatc
catatcgctagcagcgatatccacgcgcagtccgtggcttactacaacctcggctgggcc
gaataccgcgctcacgcctgtctacccccagacatccgtaagaacagccacaaaaagccg
acaaactacatcaaggccgccatggcctgcttcaagcgcgccattgagctcgaagccggc
aattcagagttctggaacgctttgggtgttgtgacctccgaagtcaacccagccgttgcc
cagcacgccttctgtcgctctctgttccttaacgagcgcggcgcccacgtttgggctaac
ctggctactttggctttggctcaaggtgaccttgcgctggccaatgaggcgttcacgcgg
tctcagtcgaccgacccggattactcgctcgcctggctaggccagggtgtcgtggcgttg
ttgaccggaaacgaaaaggatgctcggggattattcacccacgccatggaaatctcaggc
gactcatcccgcatcatctcccagcgctacgccgtctccatgttcgactacatcttgtct
tcttcttcgtcggagtccttgccaatcacaaccctaatccaacccatcttcgccctctcc
cagctgcaatccctgcactcttcgtcagcgtcttcgtcttcatcatcagacctagcctac
acccatctactggctctcttcctcgagcgtaccaacgagctttcgcgcgccatctccatc
ctcgattccttgtctacaactctcgagcaagaatatgaatccaccgagtcgcctttagcc
ctcaaacactttgccatcgtcaagtccgatctcgcgcgctgccaactttcggcgcattta
ttcaccgaggcaatcgactcggccgacctggccctccagctttcgtccgatgattccgcc
gatgaactcacagccgaagaacgtcgcaaactccgtctctccgcacacgtcactttgggt
ctagctaaatactactcccacaacatccctgccgcagtcgccgcattcgaccaagccctc
tccgaatccgaaacaaaccccgacgtcgcttgcttactggcgcaaatcctctgggccacc
ggctctgaagaatcccgcgagcgcggtcgcgacctgctattcagcgttattgccgaggct
agcgaaggcgaaggcgaaggcgaacacgaacaacatgttcaatctgtgctactactaggc
atcatcgccctgctcgataacgacagcgaatcaatggacgctgtggtctccgagctgcaa
tccctccgttccaacgacgaggggatttcacctgagcaacatgctcaactgggcgaggtg
cttcgcgcaatcctcaccgcgcttgggtcgggacaggaacagccgatggtggacgtcatg
ctccaccccttcttaccgcacggttggtccagagtcgcgcagctcgctgccagccttggt
gacaacggcggtgaagaggaagcaaaggaaataacagaagcagcatccgaaatggccctc
cgcgtagcgaggaagggcgtcccgccccgcggaaacttatctcctgaagatctggctagg
gcctatgcagggacgggaagaccggctgatgcgcaggttggatgtatggttgcgccgtgg
gaaaagagggggtgggagagtttgggggatgtggtcgctgttaatgtgggcctcaagcat
tag
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integrated database retrieval system
