Skermanella mucosa: JL100_011205
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Entry
JL100_011205 CDS
T07652
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
smuc
Skermanella mucosa
Pathway
smuc00020
Citrate cycle (TCA cycle)
smuc00190
Oxidative phosphorylation
smuc00650
Butanoate metabolism
smuc01100
Metabolic pathways
smuc01110
Biosynthesis of secondary metabolites
smuc01120
Microbial metabolism in diverse environments
smuc01200
Carbon metabolism
Module
smuc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smuc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smuc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JL100_011205 (sdhA)
00650 Butanoate metabolism
JL100_011205 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JL100_011205 (sdhA)
Enzymes [BR:
smuc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JL100_011205 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UEM23269
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Position
SKMUc:complement(2470994..2472784)
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AA seq
596 aa
AA seq
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MASAYQIIDHTYDVVVVGAGGAGLRATFGMAEKGLKTACITKVFPTRSHTVAAQGGISAA
LGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQ
RAFGGMTTKFGEGRAYRTCAAADRTGHAILHTLYQQSLKHEAEFFIEYFALDLIMDEDGV
CRGVMAWNLDDGTIHRFRAHMVVLATGGYGRAYFSCTSAHTSTGDGNAMVLRAGLPLQDM
EFVQFHPTGIYGAGCLITEGVRGEGGYLTNSSGERFMERYAPSAKDLASRDVVSRSMTIE
IREGRGVGANKDHIHLHLEHLDPAVIHERLPGIAETAKIFADVDVAKEPIPVLPTVHYNM
GGIPTNYRCEVVRPTPENPDQVVPGLMAIGEAACVSVHGANRLGSNSLLDLVVFGRAAAI
RASEIIEKGASHRSLPTGSAELALERFDRLRHAKGEVRTADLRAEMQRNMQNNCAVFRTG
EVLEEGVQLMQAAWAKRPHVSITDRTMVWNSDLVEALELDNLMYQAVVTMNSAANRTESR
GAHAREDYPDRDDENWMKHTVVSIDESGKTTFEFRPVHLYTLTNEVQVFPPKARVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctatcagattatcgaccacacctacgacgtcgtcgtcgtgggagccggc
ggggccggcctgcgggccaccttcggcatggctgaaaagggcctgaagaccgcctgcatc
accaaggtgttcccgacgcgcagccacacggtcgcggcgcagggcggcatcagcgcggcg
ctgggcaacatgggtgaggacgactggcgctggcacatgtacgacaccgtcaaggggtcg
gactggctgggcgaccaggacgccatcgagtacatgtgccgggaggcgatccccgcgatc
atcgagctggagcactacggcgtgccgttctcgcgcacggccgagggcaagatctaccag
cgcgcgttcggcggcatgaccaccaaattcggcgagggccgcgcctaccgcacctgcgcc
gccgccgaccgcaccggccacgcgatcctgcataccctgtaccagcagtcgctgaagcac
gaggcggagtttttcatcgagtatttcgcgctcgacctgatcatggacgaggacggcgtc
tgccgcggcgtcatggcctggaacctggacgacggcacgatccaccgtttccgcgcccac
atggtggtgctggcgaccggcggctacggccgggcatacttctcctgcacttcggcccat
acctccaccggcgacggcaacgccatggtcctgcgggccgggctgccgctccaggacatg
gagttcgtgcagttccatccgaccggcatctacggcgccggctgcctgatcaccgagggc
gtgcgcggcgagggcggctacctgaccaactcgtccggcgagcgcttcatggagcgctat
gctccttccgccaaggacctggcgtcccgcgacgtggtcagccgctcgatgacgatcgag
atccgcgagggccgcggcgtcggcgccaacaaggaccatatccacctgcacctggagcac
ctggacccggcggtgatccacgagcggctgcccggcatcgccgagaccgcgaagatcttc
gccgacgtcgacgtcgccaaggagccgatcccggtgctgccgaccgtccactacaacatg
ggcggcatcccgaccaactaccgctgcgaagtggtccggccgacgccggagaaccccgac
caggtcgtccccggcctgatggcgatcggcgaagccgcctgcgtgtcggtccacggcgcc
aaccggctgggttccaactcgctgctcgacctcgtcgtgttcggccgggccgccgccatc
cgcgcgtcggagatcatcgagaagggcgcgtcccatcgttcgcttccgacgggcagcgcc
gagctggcgctggagcgtttcgaccgtctgcgccacgccaagggcgaggtccggacggcc
gacctgcgtgccgagatgcagcgcaacatgcagaacaattgcgccgtcttccgcaccggc
gaggtgctggaggaaggcgtccagttgatgcaggcggcctgggcgaagcgtccgcacgtc
agcatcaccgaccgcaccatggtgtggaactcggaccttgtagaagccctggagcttgac
aatcttatgtatcaggcggtcgtgacgatgaactcggccgcgaaccgcacggaaagccgc
ggggcccacgcccgggaagactatccggaccgcgacgacgaaaactggatgaagcacacc
gtcgtcagcatcgacgagagcggcaagacgactttcgagttccgtcccgtccatctctac
acgctgaccaacgaagtccaggtgttcccgccgaaagcgcgcgtgtactga
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