Skermanella mucosa: JL100_021900
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Entry
JL100_021900 CDS
T07652
Name
(GenBank) PAS domain S-box protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
smuc
Skermanella mucosa
Pathway
smuc02020
Two-component system
smuc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL100_021900
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JL100_021900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smuc02022
]
JL100_021900
02035 Bacterial motility proteins [BR:
smuc02035
]
JL100_021900
Enzymes [BR:
smuc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
JL100_021900
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
JL100_021900
Two-component system [BR:
smuc02022
]
CheA family
CheA-CheYBV (chemotaxis)
JL100_021900
Bacterial motility proteins [BR:
smuc02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
JL100_021900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheR
PAS_4
PAS_9
PAS
CheR_N
PAS_10
PAS_8
PAS_7
THOC7
Fez1
FBF1
bZIP_1
Leu_zip
HMMR_N
WEMBL
Exonuc_VII_L
DUF3450
DUF5930
Golgin_A5
RasGAP_C
Laminin_II
Borrelia_P83
IFT57
Rootletin
DUF5089
DUF1664
CCDC22_CC
Snu56_snRNP
DASH_Duo1
Fmp27_WPPW
UPF0242
DLP_helical
ATG14
TPR_MLP1_2
Spc7
FUT8_N_cat
Perilipin
ADIP
HAP1_N
LMBR1
DUF6262
Motif
Other DBs
NCBI-ProteinID:
UEM19714
LinkDB
All DBs
Position
SKMUc:complement(4694408..4696675)
Genome browser
AA seq
755 aa
AA seq
DB search
MVDEKLSNPELEDLIRHLQEMRQVDFRGYKRTSLQRRIRQRMEEVECPDFVTYRALIDSD
PKEVANLLNTVLINVTSFFRDADAWKVLREEVIPQIIERKKDKGPIRIWSVGCASGPEPY
SAAMLFAEALGIENFCRSVKIYANDLDEDALRVARLATYDPREIEGVPQHLLEKYFERTA
NHYVFHRELRKCVIFGRHNIVQDAPISRIDLLICRNLLIYLDTSTQAAVLPRLHYALNTG
GFLFLGKAETQLARSKLFESVNLKSRIFKKVGQEWQRSLGGSLSIATENNPVRKVNQNRL
LEAIVEGSATAYVAISPQGHVMLANTMARRLLEIGPGDIGKPFQDLAVSYRPTELRSRID
EVQTTSRPLRLDNQNYHRPPDDPIWLTIDILPIHGDDGQLMATLLGFNDTTRSHLLQREL
QVTQETLETTVEELQSANEELETTNEELQSTNEELETTNEELQSTNEELETTNEELRSTN
EELETTNEEMRRQSEETSEYRLYADAILRSMDNGIIVLDQDLRVKSWNRWNENTWGLRNE
EVIGQRLSSLDIGVPLFKVNAEMQRVMSQEASAEPIEFKAIDRRGRTLECRVRVLPLMYD
SNDLRGIVLLIDDITELRRVQDFNAYLGRLVGESLNEVYILSPDTLHFQLVNKGAGQKLG
YPLDQLKQMALPELMPEVSARKLRELLAPLVSKEREEIVFETVLEARDRGPYPVEICMQY
LHGEEPPVLIAIVHDTTERQQLELADGGREQGGMA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgagaagctttcgaatcctgaactggaagacctgatccgtcacctgcaggag
atgcgacaggtcgatttccgcggatacaagcggaccagccttcagcgtcgcatccggcag
cggatggaggaggtcgaatgtccggatttcgtgacctaccgtgcgctgatcgacagcgat
cccaaggaggtcgcgaacctcctcaacacggtgctgatcaacgtgacgtccttcttccgc
gacgcggacgcctggaaggtgctgcgcgaggaggtgatcccgcagatcatcgagcgcaag
aaggacaagggtccgatccggatctggagcgtgggctgcgcctccgggccggagccctat
tccgccgccatgctgttcgccgaggccctgggcatcgagaatttctgccggtccgtgaag
atctatgccaacgatctcgacgaggatgcgctgagggtggcgcggctcgccacgtatgac
ccgcgcgaaatcgagggcgtgccgcagcacctgctggagaagtatttcgagcggaccgcc
aaccactatgttttccatcgcgaactgcggaaatgcgtgattttcgggcgtcacaacatc
gtgcaggacgccccgatctcccgtatcgacctgctgatctgccgcaacctgctgatctat
ctggataccagcacccaggccgcggtcctgccgcggctgcattacgcgctgaataccggc
gggttcctgttcctcggcaaggcggaaacccagctcgcccgatccaagctgttcgaatcg
gtcaacctgaagagccgtatcttcaagaaggtcggccaggagtggcagcgcagcctgggg
ggcagcctgagcatcgcgacggagaacaacccggtccgcaaggtcaaccagaaccgtctg
ctggaggcgatcgtggagggcagcgccacggcttatgtggcgatcagcccgcagggccat
gtcatgctcgccaacaccatggcccggcgcctgctggagatcgggcccggcgacatcggc
aagcctttccaggacttggccgtgtcgtaccgtccgaccgaactgcgcagccgcatcgac
gaggtgcagaccacgagccggcccctgcgcctggacaatcagaattatcaccgcccgccg
gacgacccgatctggctgaccatcgacatcctgccgatccatggcgatgacggccagctc
atggccaccctgctcgggttcaacgacaccacgcggtcccatttgctccagcgcgagttg
caggtgacccaggaaacgctggagaccaccgtcgaggagcttcagtcggcaaacgaggag
ctggagaccaccaacgaggaacttcagtcgaccaacgaggagctggagaccaccaacgag
gaacttcagtcgaccaacgaggagctggagaccaccaacgaggagctgcgctcgaccaac
gaggagttggagaccaccaacgaggagatgcgccgccaatccgaggagacctccgagtat
cggctctatgccgatgcgatcctgcgcagcatggacaacgggatcatcgttctcgaccag
gacctgagggtgaagtcgtggaaccgctggaacgagaatacctggggcctgcggaacgag
gaggtcatcggccagcgcctgagcagcctggacatcggggtgcccctgttcaaggtgaat
gccgagatgcagcgggtcatgagccaggaagcgtcggcggaaccgatcgagttcaaggcg
atcgaccggcgcggccgcacgctggagtgccgggtccgtgtgctgcctttgatgtacgat
tccaacgatctccgtggaatcgtcctgctgatcgacgacatcaccgaactgcgccgcgtg
caggacttcaacgcctatctcggccgtctcgtcggcgagtcgctgaacgaggtctatatc
ctgtcacccgataccctccacttccaactggtcaacaagggtgccgggcagaaactgggc
tatccgctggaccagctcaagcagatggccctgccggagctgatgcccgaggtatccgcc
cggaaactgcgcgagttgctggctcccttggtctcgaaggagcgggaggagatcgtgttc
gaaaccgttctcgaggcgcgggaccgcggtccctatccggtcgagatctgcatgcagtac
ctgcacggggaggagccgcccgtcctgatagccatcgtccatgacacgacggagcgccag
cagctcgaactggccgacggtggccgggagcagggcggaatggcgtga
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integrated database retrieval system