Serratia marcescens WW4: SMWW4_v1c13450
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Entry
SMWW4_v1c13450 CDS
T02448
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00470
D-Amino acid metabolism
smw00550
Peptidoglycan biosynthesis
smw01100
Metabolic pathways
smw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMWW4_v1c13450 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMWW4_v1c13450 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SMWW4_v1c13450 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
SMWW4_v1c13450 (ddlA)
Enzymes [BR:
smw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SMWW4_v1c13450 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smw01011
]
Precursor biosynthesis
Amino acid ligase
SMWW4_v1c13450 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
AGE17149
LinkDB
All DBs
Position
1485628..1486731
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AA seq
367 aa
AA seq
DB search
MTKLRVGVIFGGKSAEHEVSLQSAKNIVDAIDKEKFDVTLLGIDKQGQWHINDASNYLLN
AENPALIALNRSNKNVALIPGQEKQQLIEAGSAGALGQLDVIFPIVHGTLGEDGSLQGLL
RMANMPFVGAGVLGSAVSMDKDVTKRLLRDAGLAVAPFVTLTRANRAGFTFEQLSERLGL
PLFVKPANQGSSVGVSKVENRAEFDAAVALAFSFDHKVLVESAIVGREIECAVLGNDDPQ
ASVCGEIVLSDAFYSYDTKYINEQGAQVVVPAAIAPEVSDHIREVALKAFRALECFGLAR
VDVFLTPDNQVVINEINTLPGFTNISMYPKLWAASGVSYQALITRLIELALERHQQDRAL
NSSVFDR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaactacgtgttggggtgatttttggcggtaaatcggcggagcatgaggtgtcg
ctgcagtcggccaaaaacattgtggatgcaatcgacaaagagaagtttgacgtcacgctg
ctggggatcgacaaacaggggcagtggcacatcaacgacgcctccaactatctgctcaat
gccgagaacccggcgctgatcgcgctgaaccgctcgaacaagaacgtggcgctgatcccg
ggccaggaaaagcagcagctgatcgaagcgggcagcgccggcgcgctggggcagctcgac
gtcatcttcccgatcgtgcacggcacgctgggagaggacggctcgctgcaggggctgctg
cgcatggccaatatgccgttcgtcggcgccggagtgctcggctcggcggtcagcatggat
aaagacgtgaccaaacgcctgctgcgcgacgccgggctggcggtggcgccgttcgtcacc
ctgacgcgcgccaaccgcgccgggttcacgtttgagcaactgagcgagcgcctcggcctg
ccgctgttcgtcaaaccggccaaccagggctcgtcggtcggggtcagcaaggtggaaaac
cgcgccgagtttgacgcggcggtggcgctggccttcagtttcgatcacaaagtgctggtg
gagtcggcgatcgtcggccgcgagatcgagtgtgcggtgctgggcaacgacgatccgcag
gccagcgtatgcggcgagatcgtgctgagcgacgccttctactcctacgacaccaaatac
atcaatgagcagggcgctcaggtggtggtgccggcggcgatcgcgccggaagtaagcgac
cacatccgcgaggtggcgctgaaggcgttccgcgcgttggagtgcttcgggttggcgcgg
gtggatgtgttcctgacgccggacaaccaggtggtaatcaacgaaatcaacacgctgccg
ggcttcaccaacatcagcatgtatcccaagctgtgggctgccagcggtgtcagctatcag
gcgctgatcacgcgcctgatcgaattggcgctggagcgccaccagcaggatcgcgcgctg
aacagctcggtgttcgatcgctaa
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