Serratia marcescens WW4: SMWW4_v1c27280
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Entry
SMWW4_v1c27280 CDS
T02448
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smw
Serratia marcescens WW4
Pathway
smw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMWW4_v1c27280 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c27280 (xthA)
Enzymes [BR:
smw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SMWW4_v1c27280 (xthA)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SMWW4_v1c27280 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AGE18523
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All DBs
Position
2962617..2963423
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKAEPLAVRRGFPTDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKTRFYQDLQNYLEQQLSAESPVLIMGDMNISPSDYDIGIGEDNRKRWLRTGKCSFL
PEEREWMDRLLNWGLVDTYRHANPGRNDEFSWFDYRSKGFDDNRGLRIDLLLASTPLASR
CIATGIDYQTRGMEKPSDHAPVWAEFTL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctcttttaatatcaatggactgcgcgcgcgtccgcatcagctggcggca
attatcgaacagcaccagcccgacgtgatcggtctgcaggaaaccaaagttcacgatgac
atgttcccattggaagaagtcagccagcacggctatcacgtgttctatcacgggcaaaaa
ggccattacggcgtggcgctgctgaccaaagcggagcccctggccgtgcgccgcggtttc
ccaaccgatgaagaagacgcgcagcgtcgcatcatcatggccgatctggctacgccgcag
ggcacgctgacggtgatcaacggctacttcccgcaaggtgaaagccgcgaccacccgatc
aaattcccggctaaaacacgcttttatcaggatctgcaaaactacctggagcagcagctg
tcggcagaatccccggtgctgatcatgggcgacatgaatatcagcccgagtgattatgat
atcggcatcggcgaagacaaccgcaaacgctggctgcgcaccggcaagtgctccttcctg
ccggaagagcgcgaatggatggatcgcctgctgaactggggcctggtggatacctatcgc
cacgccaacccggggcgcaacgacgagttctcatggttcgactaccgctccaaagggttc
gacgacaaccgcggcctgcgtatcgatctgctgttggccagcaccccgctggcttcgcgc
tgcatcgccaccggcattgattaccaaacccgcggcatggagaaaccttctgaccatgcg
ccggtctgggcggaattcacgctgtaa
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