KEGG   Sinorhizobium meliloti SM11: SM11_chr3080Help
Entry
SM11_chr3080      CDS       T01885                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
smx  Sinorhizobium meliloti SM11
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:smx00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    SM11_chr3080
   03410 Base excision repair
    SM11_chr3080
   03420 Nucleotide excision repair
    SM11_chr3080
   03430 Mismatch repair
    SM11_chr3080
Enzymes [BR:smx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SM11_chr3080
    6.5.1.6  DNA ligase (ATP or NAD+)
     SM11_chr3080
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SM11_chr3080
DNA replication proteins [BR:smx03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SM11_chr3080
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SM11_chr3080
DNA repair and recombination proteins [BR:smx03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SM11_chr3080
   NER (nucleotide excision repair)
    Other NER factors
     SM11_chr3080
   MMR (mismatch exicision repair)
    Other MMR factors
     SM11_chr3080
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3072392..3074005
Genome map
AA seq 537 aa AA seqDB search
MKAFAELLDRLVLTPQRNAKIRLLVDYFRGAPDPSRGYALAAIAGTLSLNTVKPALIRDL
LLERMDDVLFHYSYDYVGDLAETVSLAWEPPPDVALQDIPLGEVVERLQRAGRSEVRSLV
RDFLDRLDTSGRFALLKLATGGLRIGVSARLAKQALAEMGGKEVSEIETLWHGLEPPYLP
LFLWLTGEAEMPVLKTPAVFHSVMLATAVGDGDLDGLDPADFAAEWKWDGIRVQLANVGG
ARRLYSRSGDEISSAFPEIIEAADITGVIDGELLVGGTMRSNRATGTFADLQQRLNRKTV
SRKLMDEYPAFIRAYDILFSGERDIRPEPFRVRREALSSLIEAASPQHFDLSPLVGFSSW
KELDELRSSPPDPVIEGVMLKRLDSPYMAGRAKGPWFKWKRAPFNIDAVLMYAQRGHGKR
SSYYSDFTFGVWAEGEDGASLVPVGKAYFGFTDAELEVLDRFVRDNTVERFGPVRAVRAE
PDSGFVVEVAFEGLNRSTRHKSGVAMRFPRIARLRPDKLPRDADRLETLQAMMGTQR
NT seq 1614 nt NT seq  +upstreamnt  +downstreamnt
atgaaagcatttgccgaactgctcgaccggctcgtgctgacgccgcagcgaaacgccaag
atccggttgctcgtcgactatttccgcggcgcacccgatccgagccgcggctatgcgctg
gcagcgatcgcggggacgctctcgctcaacacggtgaagcctgccctcattcgcgacctg
ttgctcgagcgcatggacgacgtgctgttccactattcctacgactatgtcggcgacctc
gcggaaacggtctctctcgcctgggagccgccgccggacgtcgcccttcaggacattccg
ctcggcgaggttgtcgagcggctgcagcgggccggccgctccgaggtccgttcgctcgtc
cgcgactttctggaccggctcgacacctccggccgcttcgccctcctgaagctcgcgaca
ggaggcttgcgcatcggggtctcggcacggctcgcgaagcaggcgctggcggagatgggc
ggcaaggaggtgagcgagatcgaaacgctctggcacggattggagccgccatacctgccc
cttttcctctggctcaccggtgaggcggagatgccggtgctcaagacacctgcggtcttt
cattcggtgatgctcgcaacagcggtcggcgatggcgatctcgacgggctcgatccggcc
gacttcgcggccgagtggaaatgggacggcatccgcgtccagctcgccaatgtcggcggg
gctcgacgcctctattcgcgcagcggcgacgagatatcctccgcctttcccgagatcatc
gaagctgccgatatcacgggcgtcatcgacggcgagcttctggtcggcggaacgatgcgc
agcaaccgcgccacgggcacattcgcggacctgcagcaaaggctgaaccgcaagaccgtc
agccgcaagctgatggacgagtatccggccttcatccgtgcctacgacattctcttttcc
ggcgagcgcgatatcaggcccgagccctttcgtgtgcgccgcgaagccctgtcgtcgctg
atcgaagcggcctcgccgcagcatttcgatctctcgccgctcgtcggcttttcaagctgg
aaggagctcgacgagctgcgctccagcccgcccgatccggtgatcgaaggcgtcatgctg
aaacggctggattcgccctatatggccggacgggccaaggggccgtggttcaagtggaag
cgggcgcccttcaatatcgacgccgtgctgatgtatgcccagcgcggccatggcaagcgg
tccagctattactccgatttcaccttcggcgtctgggcggagggtgaagacggggcgagc
ctcgttcccgtcggcaaggcctatttcggcttcaccgatgccgagctcgaggttctcgat
cgcttcgtgcgcgacaatacggtcgaacgcttcggccccgtgcgcgcggtgcgcgccgaa
cccgacagcggcttcgtcgtcgaggttgcctttgaaggcctcaaccgctccacgcgtcac
aaatccggggtagccatgcgcttcccgcggattgcccgcctcagacccgacaagctgcct
cgcgacgccgacaggctcgagacactgcaggcgatgatgggaacgcaacgctga

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