Sphingomonas melonis: BJP26_12230
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Entry
BJP26_12230 CDS
T04509
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
smy
Sphingomonas melonis
Pathway
smy00470
D-Amino acid metabolism
smy00550
Peptidoglycan biosynthesis
smy01100
Metabolic pathways
smy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
smy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJP26_12230
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJP26_12230
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BJP26_12230
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smy01011
]
BJP26_12230
Enzymes [BR:
smy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BJP26_12230
Peptidoglycan biosynthesis and degradation proteins [BR:
smy01011
]
Precursor biosynthesis
Amino acid ligase
BJP26_12230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AOW24245
LinkDB
All DBs
Position
complement(2577403..2578335)
Genome browser
AA seq
310 aa
AA seq
DB search
MHIAVLMGGWSAERPVSLLSGKGCADALEANGHRVTRIDMGRDVAARLAAAQPDLVFNAL
HGSPGEDGSVQGMLDLMGIPYTHSGLATSVIAIDKVLTKQVLVPAGIPMPGGRIVKSADI
HERDPLQRPYVLKPINEGSSVGVAIVTDDGNYGNPIGRDVAGPWAEFDELLAEPYVRGRE
LTTAVLGERALGVTELKPKTGWYDFDAKYTDGLTEHVCPADIPDEIADACKRLALEAHRL
LGCKGASRSDFRWDDERGVDGLFLLEVNTQPGMTPLSLVPEQARHIGMSYEQLVQAIVDE
ALADAKAAAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcgcggttctcatgggcggctggtccgccgaacgccccgtatcgctcctgtcg
ggcaagggttgcgccgatgcgctcgaggcgaacggccaccgcgtcacccggatcgatatg
ggccgcgacgtcgccgcgcgccttgccgcggcgcagcccgatctcgtcttcaacgcgctg
cacggctcgcccggcgaggacggcagcgtgcagggcatgctcgacctgatgggcatcccc
tatacccattcgggcctcgccacgtcggtcatcgcgatcgacaaggtgctgaccaagcag
gtgctcgtccccgccggcatccccatgccaggcggccggatcgtcaagtccgccgacatc
cacgaacgcgatccgctgcagcgcccctatgtcctcaaacccatcaacgaaggttcgtcg
gtcggcgtcgcgatcgtcaccgatgacggcaattacggcaatccgatcggccgcgacgtg
gcgggaccttgggccgagttcgacgaacttctcgccgaaccctatgtccgcggccgcgag
ctgacgaccgcggtgctgggcgaacgcgcgctgggcgtcaccgaattgaagcccaagacc
ggctggtacgatttcgacgccaaatataccgatggcctgaccgaacacgtctgccctgcc
gacatccccgacgagattgcggacgcctgcaagcggctcgcactggaggcgcatcgcctg
ttggggtgcaagggcgccagccgctccgacttccgctgggacgacgagcgcggcgtcgac
ggcctgttcctgctcgaggtcaacacgcagcccggcatgacgcccttgagcctcgtcccc
gaacaggcgcgccacatcggaatgagctacgaacagctcgtccaggcgatcgtggacgag
gcgctcgccgacgcgaaagctgctgcgggatga
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