Stenotrophomonas maltophilia D457: SMD_3111
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Entry
SMD_3111 CDS
T02061
Symbol
ligC
Name
(GenBank) ATP-dependent DNA ligase
Organism
smz
Stenotrophomonas maltophilia D457
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
LPD22
Motif
Other DBs
NCBI-ProteinID:
CCH13632
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Position
3453686..3455293
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AA seq
535 aa
AA seq
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MKAFAALYQRLDRSTATLDKRAALIDYFRQAGAHDAAWALYLLSGGKVGGARRKIAASGE
LRAWIAEESGLPPWLVEDSYAQVGDLAETLTLLLDDPSQPAADRALADWIEQHLLAVANQ
PEAVRRAAVVAGWQQLCSSERLVFNKLLTGALRVGVSQRLVQQALAEWSGLDIARIAQRM
LGEWVPSPALLGQLLSPDELPLDRQQPYPFFLASPLEGDPAERLGSIEDWLLEWKWDGIR
LQLLRRRGEVALWSRGEERLDGRFPEIEQAAMALPDGCVLDGELLAWDEATDLPRAFTAL
QTRIQRRKPGAATLRNTPVRVLAYDLLEHDGADLRELPLRERRARLADVVGALGDARIQL
SPDVAAEDWPQAAAMRDVARERGVEGLMLKRRASPYQAGRRRGDWWKWKVDPLTIDAVLL
YAQAGHGRRSTLYTDYTFGVWDGDTLVPVAKAYSGLDDKEILALDRWIRANTRERFGPVR
SVRPEHVFELGFEAVNRSSRHKSGIAVRFPRILRWRHDKPASEADQLATLQALAR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttcgcggcgctctaccagcgcctggaccgcagcaccgccacgctggacaag
cgtgcggcattgatcgattacttccgccaggcaggcgcgcacgatgcggcgtgggcgctg
tacctgctcagcggtggcaaggtgggcggcgcacgccgcaagatcgccgccagtggcgaa
ctgcgcgcctggattgccgaagaatccggcttgccgccatggctggtggaagacagctat
gcgcaggtcggtgacctggccgaaacgttgaccctgctgctggatgatccatcccagccg
gccgccgaccgtgcgttggcggattggatcgaacagcatctgctggcggtggccaaccag
cccgaagcggtacgccgtgcggcggtcgtcgcgggctggcagcagctgtgcagcagcgaa
cgcctggtgttcaacaagctgctgaccggcgccctgcgcgttggcgtctcgcagcggctg
gtgcagcaggcactggcggagtggtccggcctggacatcgcgcgcatcgcccagcgcatg
cttggcgagtgggtgccctcgcccgcactgctgggccagctgctgtcgccggatgagctg
ccactggaccggcagcaaccctacccgttcttcctcgcctcgccactggaaggcgatcct
gccgaacgcctcggctccatcgaagattggctgctggaatggaagtgggatggcatccgc
ctgcagctgctgcgccggcgcggcgaggtcgcattgtggtcacgcggcgaagagcggctg
gatggtcgcttccccgaaatcgaacaggcggcgatggcgcttcccgatggctgcgtgctg
gacggagagctgctggcctgggacgaagccacggacctgccgcgtgcattcaccgcgctg
cagacccgcatccagcgccgcaagcccggtgcggctaccctgcgcaacacgccggtgcgc
gtgctcgcctatgacctgctggaacacgatggcgcggacctgcgtgagttgccgttgcgg
gaacggcgtgcacggcttgccgacgtcgtcggtgccctgggtgatgcacggatccagctc
tcacccgacgttgccgccgaagactggccgcaggcggcggcgatgcgcgatgtggcacgc
gaacgtggcgtggaagggctgatgctgaaacgtcgtgcctcaccctaccaggccgggcga
cgccgcggtgactggtggaaatggaaggtcgatccgctcaccatcgatgcagtgctcctg
tacgcgcaggctggccatgggcggcgcagcacgttgtacaccgactacaccttcggcgtc
tgggacggcgacacgctggtaccggtggccaaggcctattcgggcctggatgacaaggag
atcctcgcgcttgatcgctggatccgcgccaatacccgcgagcgctttggcccggtgcgc
agcgtacgccccgaacacgtcttcgaactgggattcgaggcggtcaaccgcagcagccgg
cacaagtccggtatcgccgtacgctttccacgcatcctgcgctggcgccacgacaagcca
gccagcgaggccgatcagctggctaccctgcaggcgctggcgcgatga
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