Sphingomonas naphthae: PQ455_03080
Help
Entry
PQ455_03080 CDS
T08850
Name
(GenBank) IS630 family transposase
Organism
snap
Sphingomonas naphthae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_3
HTH_Tnp_IS630
HTH_28
HTH_Tnp_1
HTH_32
HTH_23
DDE_1
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
WCT74230
LinkDB
All DBs
Position
join(652911..653252,653254..653859)
Genome browser
AA seq
315 aa
AA seq
DB search
MARAYSQDLRDRVIDAVLRGGESRRSASRRFGVSEASAIKWVQRVERLGDRRCAGTGGHR
PSKVKPERDWLLATIAEEPDITLAALSARLLAERGVRADTGMLSRFFTGEGISFKKTVLP
SEQDRRDVARRRASWKRYQGKLDPRRLVFIDETWAKTNMTRTHGRCRRGERLHAKVPHGH
WKTLTFLAALRHDRIDAPAVIDGPINGKSFLAYVEQILIPTLGPGDIVILDNLGSHKGEA
VRSAIRAAGARLLFLPPYSPDLNPIEQVFAKLKTLLRKAAERTVETTWRRIGSLLDAFYP
SECANYLVNSGYASI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagcctattcgcaagatttgagggaccgggtgatcgatgcggtgctgcgtggc
ggagagagccggcggtctgcgtcgcggcgcttcggggtaagcgaggcctcggcgatcaaa
tgggtgcagcgggtcgagcggctgggtgaccggcggtgcgccggcactggcgggcaccgt
ccctcgaaggtgaagccggagcgcgactggttgctggcgacgatcgcggaggagcccgac
atcacactggcggccctgtcggcccggctactggccgagcgcggcgtacgggcggacacc
ggcatgctgtcgcgcttcttcaccggcgaaggcatcagcttcaaaaaaaccgtgctgccc
agcgagcaggaccggcgtgacgttgcccgccggcgggcgagctggaaacggtatcagggc
aagctcgatccccggcggctggtctttatcgacgagacctgggccaagaccaacatgacg
cgcacccatgggcgttgtcggcgcggggagcgtctccatgccaaggtgccgcatggccac
tggaagacgctgactttcctggcggcgctccgccacgaccggatcgatgcacctgcggtg
atcgatggcccgatcaacggcaaaagcttcctcgcctacgtcgagcaaatcctcatcccg
acgcttggccccggcgacatcgtcatcctcgacaatctcggcagccacaaaggtgaggct
gtgcgcagcgccatccgggccgcaggtgcaaggctactgttccttccgccctacagccca
gacctcaacccgatcgagcaggtcttcgccaagctcaagacgctcctccgcaaggccgca
gagcgcactgtcgaaaccacatggcgacgcatcggatcgctcctcgacgccttctacccg
tccgaatgcgccaattacctcgtcaactccggctatgcttcaatctaa
DBGET
integrated database retrieval system
