Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage): SPN23F05520
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Entry
SPN23F05520 CDS
T00843
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sne
Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
Pathway
sne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPN23F05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sne03019
]
SPN23F05520
Messenger RNA biogenesis [BR:
sne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPN23F05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
GPW_gp25
SUFBD
Motif
Other DBs
NCBI-ProteinID:
CAR68401
LinkDB
All DBs
Position
537957..539618
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AA seq
553 aa
AA seq
DB search
MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFENSD
RIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFNDFHVIDE
NTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATDFARLAE
IGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSRIQQIFD
AADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIILETGRMG
EPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVKLITQSL
HVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFIPKKGTTMA
YENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKIVAR
ARVHTRGFVYLKKSRDILRESSELINQTVEEYLQGDDFDWADLKGKVRDNLTKYLFDQTK
RRPAILPVVMEAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatcagtttaacaacacttggtggtgtgcgtgagaatggaaaaaatatgtac
attgctgaaattggagagtccatttttgttttgaatgtagggttaaaatatcctgaaaat
gaacaattaggggtcgatgtggtgattccaaacatggattacctttttgaaaatagcgac
cgtattgctggggttttcttgacccacgggcatgcggatgccattggtgctctaccttat
ctcttggcagaggctaaagttcctgtatttgggtctgagttgaccattgagttggcaaag
ctctttgtcaaaggaaatgatgccgttaagaaatttaatgatttccatgtcattgatgag
aatacggagattgattttggtgggacagtggtttccttcttccctacgacttactccgtt
ccagagagtctgggaattgtcttgaagacatcggaaggaagcatcgtttatacaggtgac
ttcaaatttgaccaaacggctagtgaatcttatgcaactgattttgctcgtttggcagag
attggtcgtgacggcgtcctggctctcctcagtgattcggccaatgcagacagcaatatt
caggtggctagtgaaagtgaagttagggatgaaattacccaaactattgctgactgggaa
ggtcgtatcatcgttgcagctgtttccagtaatctttctcgtattcagcagatttttgac
gctgcggataaaacaggtcgacgtatcgtcttgacaggatttgatattgaaaatatcgtc
cgcacagcgattcgtcttaagaagttgtctttagccaacgaaattctcttgattaagcct
aaagatatgtctcgctttgaagaccatgagttgattattcttgagacaggtcgtatgggt
gaacctatcaatggacttcgtaagatgtcgattggtcgccatcgttatgtagaaatcaag
gatggggacctggtctatattgctacggctccgtctattgctaaagaagcctttgttgcg
cgtgtggaaaatatgatttatcaggcaggtggggttgtcaaattgattacccaaagttta
catgtatcagggcacggaaatgtgcgtgatttgcagctgatgatcaatcttttgcaacct
aagtacctcttccctgtccaaggggagtatcgtgagttggatgctcacgctaaggctgcc
atggcagttgggatgttgccagaacgcatcttcattcctaaaaaggggacgaccatggct
tacgagaatggagactttgttccagctggatcggtttcagcaggagatatcttgattgat
gggaatgccattggtgatgttggaaatgttgttcttcgtgaccgtaaggtcttgtcagag
gatggaattttcatcgtggctattacagtcaaccgtcgtgagaagaaaattgtggctagg
gctcgtgttcatacgcgcggatttgtttatctcaagaagagtcgcgatattctccgtgaa
agttcagaattgattaaccaaacggtagaagagtatcttcaaggagatgactttgactgg
gcagatcttaaagggaaggttcgagataatttgaccaagtatctctttgaccaaaccaag
cgtcgtccagctattttaccagtagtcatggaagcaaaataa
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