Salvelinus namaycush (lake trout): 120023125
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Entry
120023125 CDS
T07522
Name
(RefSeq) AT-rich interactive domain-containing protein 4A-like isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023125
03036 Chromosome and associated proteins [BR:
snh03036
]
120023125
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
ARID
120023125
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120023125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
Motif
Other DBs
NCBI-GeneID:
120023125
NCBI-ProteinID:
XP_038823029
UniProt:
A0A8U0TNA4
LinkDB
All DBs
Position
Sna28:12429853..12481632
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AA seq
1409 aa
AA seq
DB search
MKAADEPAYLTVGTEVSAKYRGAFCEAKIKTVKRTVKVKVMLKGDTTSQVVQDDQVKGQL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHANDDKESSSSDDDSEDRRRLNDDLLGKVA
NIQTGTDRTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFRTVARKEIHEVNMDSISK
AEFSSRNGLDEAVHFLKTKVVPDSWKMDMSEILESSSSDEEDKEGKDSEEEEEKEDDEQP
EDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYQQGGCDKIESGS
VWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTIHHNEARPASQSSQ
SQTEQKAAQVPEVKDKDKVGKCPTPPVQNESAAATEDKPAQEEAESGSESDKESHKDIAS
PRVRSSQKQLLSFVGRRRCTVTPVKAEVKEPVKLEKINEQEPSGLGVSETSGEETGGQKE
SSRSDGGDTQGNGCSRRLEESDKESEDEGEDEDEDSERRVGEGAEDEDSEDSVTGTKVKV
KYGRGKTQKIYEANIKKTENDDAGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKNK
QKKKVMNKEDGEKDKQGNLGGLRGRPLLRTTPPSANRSVSKTPSREGRSSSKSKSDTSPL
PNGEGTPRRRTRTSGMYDSDRDANSNDESGNSSEDSESEDSPEKKPAWAERTDPATARKQ
EEEEDLRVERGRAEAVAAAAAQAAAAQLQPPSSPKEKEQQQEDKLPEREPEKDEAEEQPQ
TPPMTPEPDRPKEEDPPNLKSPRPKASRRSNVGEPERNTNNTGSEIPTKTIITTTPNHTE
TESFPSPCPLKRQDEPMVVLHCLPAEHLPSMPDLPIMDSDTDSAPEEEICREERGVAKRK
ATDHRTPDKKVRLDWREDTARMALPGGRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPGGR
PTTPEGRLESGGLKEEECLTPAKGKTEPEVKTEMPALTPEVRCRGPGEGGFAGGQPRSEQ
PDYGAEEELMPQIGPEALVCHEVDLDDLDEKDKTSAEDLLMMMSQGKVHAPPPSNASSHH
PQTHNNPPPSSGDAAPPQVFSPTSAPSPDESISTKSESDVTIEVDSVAGESQEGLGDNES
ANSNCFEANTSSSNSSMSLQERDTKDRGQKRLMDCNMSCSAKKQKRNQKRPSTMSKMEKN
GAEYSSDSEDLAVMDPSCKKTPVKHSMSKGSLKLVSPNSKELEKDKHKHKQSSFPSPRTY
KWTFQLNELDSMTSAERISFLQDKLQDIRKYYMSLKSEVASIDRRRKRLKKKEREVSHTT
ASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcggacgagcctgcctacctgaccgtggggacggaggtcagcgcgaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggacagtgaaggttaaggtg
atgctcaaaggagacactacctcacaagttgttcaagatgaccaagtgaaaggacagttg
agggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaactcacagacgccagttggtacacagtggtgtttgacgatggggatgagaagaca
ctccgcaggacgtctctgtgtcttaagggcgagagacattttgctgagagcgagacgttg
gaccaactgccccttaccaacccggagcactttggcacccccgtaatcgggaagaaggga
aaccgcggaggaaggaggtcatctcaggctcatgcgaacgatgacaaggagtcgtcgtcc
agtgatgacgacagtgaggacaggaggcggctaaatgatgacctgctgggtaaagtggcc
aatattcagactgggacagaccggacatcctggtacctggccctggtgatatcgcccagc
tgcaatgatgacctgacagtcaagaaagaccaatgtttagtgagatcatttgcagactcc
aaatttcgaactgtggcaagaaaggagatccatgaagtgaacatggacagcatctctaaa
gctgagttctcgtcgaggaacgggttggacgaggcagtgcatttcctcaaaaccaaggtg
gtccctgacagttggaagatggacatgagcgagatcttagaatcctccagcagtgacgag
gaggacaaggaaggaaaagatagtgaggaggaggaggagaaggaggatgacgagcagcct
gaggatgaggcggacccagaggagagggatcacttcctgcagcagctgtataagttcatg
gaggatcgagggacgccaattaacaagcctcctgtgctcggctacaaggatctgaacctc
ttcaagctcttcaggctagtctaccagcaggggggctgtgacaaaattgaaagtggatct
gtgtggaaacaaatctacatggacctgggcattcccatcctaaattctgctgcctcctac
aatgtgaagactgcctacagaaagtacctgtatggctttgaggagtactgccgctcagcc
tgcatcgtgttcaggactatccaccacaacgaggctcgtccagcgtcccagtcctcccag
tcccagacagagcagaaggctgcccaggtccctgaggtgaaggacaaagacaaggttggc
aagtgcccaacaccacccgtccagaatgagtctgctgcagccacagaggacaagcctgcc
caggaggaggctgagtcggggagtgagagcgacaaagagagccacaaagatatcgcctct
cccagggttaggagttctcaaaagcaacttttgtcctttgtggggaggagacggtgcact
gtgaccccggtcaaagctgaggtgaaggagcctgtcaagctggagaagatcaatgagcag
gagccgagtggtctgggtgtgagtgagaccagcggagaggagacgggtggtcaaaaagag
agcagcaggtcagacggaggggacacccaggggaatggatgcagccgacgtctggaggag
tccgataaagagtctgaggacgaaggggaagatgaggatgaggacagcgagaggagagtt
ggagaaggggctgaggatgaggactcagaagactctgtgacagggactaaggtgaaggta
aagtacggccgagggaagacccagaagatatatgaggcaaacatcaagaaaactgagaac
gatgatgccggagatgtcctctacctggtacactactacggctggaatgtcaggtatgat
gagtgggtcaaagcagatcggatcatctggcctgtcgacaagggcggaacaaaaaataaa
cagaaaaagaaagtcatgaacaaagaggatggagagaaggacaagcaggggaatctgggt
gggttgagaggccgccctcttctcagaaccactccccccagtgccaaccgcagcgtctcc
aagaccccgagccgtgaggggcgctccagcagcaagagcaaatctgacacatcacccctg
cccaatggagagggtacccctcgccgacgcacaagaacctctgggatgtatgactcggac
agggatgccaactccaatgatgagtcagggaattcgtccgaggacagtgagtcagaggat
tcgccggagaagaagcctgcctgggcggagagaacggaccccgccacggcccgtaaacag
gaagaagaggaggacctaagggtggagagaggaagagcagaggcagtggccgccgcagca
gcccaggcagcagcagcacagctccagccccccagcagccctaaggagaaggagcagcag
caggaggacaaactccctgagagggagcctgagaaagatgaggctgaggagcagccccag
acgcctcccatgacccctgaacccgacagacccaaggaagaggacccccctaacctgaaa
tcccccaggcctaaagcatcacgtagaagtaacgttggagagccagagaggaacaccaac
aacactggctctgagatacccaccaaaaccatcatcaccaccactcccaaccacactgag
acggagtcgttccccagcccatgccccctgaagaggcaggatgagcccatggtggtcctt
cactgtctccctgctgagcacctccccagcatgccagacctccccatcatggactccgac
acagactccgccccggaggaggagatctgcagggaggagcgaggcgtggccaagcgtaaa
gccaccgaccacaggacaccggacaagaaggtgcgtctagactggagggaggatactgcc
agaatggcattgccgggcgggaggccccatgactcgccgggcgggaggccccatgactcg
ccgggcgggaggccccatgactcgccgggcgggaggccccatgactcgccgggcgggagg
cccacgactccagaggggagactggagtcggggggactgaaagaagaggagtgtctgacg
ccagcgaagggtaaaacggagccggaggttaaaacagagatgcctgcgctcactccggag
gtgcggtgtcgaggtccaggagagggaggttttgcaggaggtcagcccaggtcggagcag
ccagactatggggcagaggaggagctgatgccccagatagggcctgaggcgctggtctgc
cacgaggtggatttggacgacctggatgagaaggacaagacctcagcagaagacctccta
atgatgatgagccaagggaaggtccatgctccccctccatccaatgcctcctcccaccac
ccccagacccacaacaaccctcctccgtcctccggtgacgctgctcctccacaagtcttt
tcccccacctcggcccctagccctgatgagtctataagcaccaagagtgagagcgacgtc
accatcgaggttgacagcgtagctggggagtctcaggaggggctcggtgataatgagtcg
gccaactccaactgctttgaagccaacaccagctctagcaactccagcatgtcactacag
gagagagacaccaaggacagaggtcagaaaaggttgatggactgcaatatgagttgttct
gcaaagaagcagaagcgcaaccagaaacggccaagcacaatgtccaaaatggagaagaat
ggagcagagtacagcagtgacagtgaggacctggctgttatggacccctcctgtaagaag
actccagtgaaacactccatgtctaaaggaagcctgaagctggtctctcccaacagtaag
gagttagagaaggacaagcacaaacacaagcagtcctccttcccctcccctcgcacatac
aagtggaccttccagctcaatgaactggacagcatgacaagtgctgagaggatttccttc
ttacaagacaaactacaggatataaggaagtattacatgtcactcaagtctgaagtggcc
tccatagacaggaggcggaagaggttaaagaagaaagaaagagaagtgtcccacaccaca
gcttcaacatcgtctggctcgtcagacactgggatgagcccctcttccgcctcaccgact
cagaacactgtggctgtcgagtgcaggtga
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integrated database retrieval system
