Salvelinus namaycush (lake trout): 120059296
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Entry
120059296 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120059296
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120059296
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120059296
Protein kinases [BR:
snh01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
120059296
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120059296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120059296
NCBI-ProteinID:
XP_038864172
UniProt:
A0A8U1C0Y3
LinkDB
All DBs
Position
Sna14:23907225..23933552
Genome browser
AA seq
1188 aa
AA seq
DB search
MADNKGEEDMESTSKLNSEPRGEDSGDPELKDVNSVIVIEPDSKEGDDLHSQENVSQMPT
PANVGGGGDASSNSAGAGGAGSTSSSPVGNTNGGTTESSGAGDIAATSPTFTTEMSPPPT
VPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVPGPNG
QPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSAQMCTSCEDNADTIGF
CAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGASGQRPVFCPVHKQEPLKLFC
ETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMAKLQEKKTYVHYSHAHVTNRL
KEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIANLARQ
ILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPTFWAK
NVVNLGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQQAFAQ
QKQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPPMVQQQPPRLISMQAQQRG
PMNGGPLMYPPHHLRLAPGQGRMPSPSAQPRMPNGQQYPPMMQPQLQRQHSNPGHAGPFP
VASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIELIPSVTNPENLPCLPDIPPIQL
EDAGSSSLDALLSRWISASTYPQLGLWPPVDMNPSPGLSTHSPGSSGLSNSHTPVRPSST
SSTGSRGSCGSAGRPVPASAPMEQQVKVKQEPGIEKECGFSGTTTSNVKTERGKDGGRSA
CMMSSPEISRTPPLPVLGSVASASSVQDALKKLGEHVKTEPQDQEACSGANGPSKAPSIS
PSTKPSDAPLTNSKGAGPATLRTPRTAMGTNQSGAGGKDDDPNEDWCAVCNNGGELLCCD
RCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPELEYEPDDEPRSEKDTSEKGLSPEDQ
RRCERLLLNVFCHELSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLKHVQHYQSPIE
FVSDVRLVFSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAQAGKAVSLYFEERLLELYPD
ESFPEVPEEPEAPVGEGEEADLTEDSEDEFVQPKRKRLKTDENMLHIK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagcacttccaaattaaattcagaacca
cggggagaggatagcggggaccccgaattgaaagatgtgaattcggtgattgttatagag
cccgattcgaaagaaggagatgatttacattcccaagagaatgtttctcagatgcctaca
cccgctaacgttggtggaggaggggacgctagcagcaacagcgcgggcgcagggggggca
ggcagcacaagcagcagcccagttgggaacaccaatgggggtacaaccgagtcctcgggt
gctggggacattgctgcaacctcaccaacattcacaaccgaaatgtccccaccgccgacg
gttccaccagccaaccccgtcaccccaataaaccttatggatacgtgtgctgtgtgtaaa
caaagtctccagacccgtgactgtgaacctaaactattaccttgtcttcactcattttgc
ttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgcccgggccgaacgga
cagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgtcaagactgcaaa
cagagcgacatcattgacaactactttgtcaaggacactaccgaggcctccaacacttca
gatgaaaaatctgcacagatgtgcaccagttgtgaggacaacgcagataccataggcttc
tgtgcagaatgtggagagtggttgtgcaagacctgcatcgaggctcaccagagggtcaaa
atcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggagtctgtaggtgcg
tcgggtcagagacctgttttctgtcccgtccacaaacaggagcccctgaaactcttttgt
gaaacctgtgacacactcacctgtcgggactgccaactgctggagcacaaggagcacagg
taccaatttctggaggaggccttccagaaccagaaaggcttcattgagacacacatggcc
aaactgcaggagaaaaagacctatgtccactactctcacgctcacgtgacaaacaggcta
aaggaagttactgagacccataggaaggtggagcatgagatcaagatagccgtgtttact
cttatcaacgaaatcaacaagaagggcaagtgtttactgcagcaacttgagagtgtgact
aaggagaggagcatgaagctgttttcccagcagacagacatcgccaacctggccaggcag
atcctccacgtgctcaacttcacccactctgccattaacagcggcagcagcaccgccctg
ctttacagcaagaggctgatcatctaccagctgcgcaaggttctgaaggctggactggaa
ccagtgcctcaggctaatggttctgttcgcttcttctgtgaccccacattctgggctaag
aatgtggtcaacctagggaacctggtgattgagaagatgccccaggctcagcaccctccc
aacattatggtggggcccatctccccgggccatggccacccaggccacggaaaacaccca
gggcagatcaacctggctcagctccggctgcagcacatgcagcagcaagccttcgcccag
caaaaacaacagcagcagcaccaacaaccacaccaacaacaacagcaacaccaacagagg
atccaggagcagatgcgtattgcttcccaaatgtcccagcagcaccccaggcagggtgga
cctccgatggtacagcaacagcccccgcgcctcatcagcatgcaggcccagcagaggggc
cccatgaatggcggtcccctcatgtaccccccccatcacctgcgcctggccccgggacag
ggccgcatgcccagccccagcgcccagccacgcatgcccaacggccagcagtaccccccc
atgatgcagccccagctgcagagacagcattctaacccaggtcatgctggacccttccca
gtggcctctctccacaacgtgagcgcagccaaccccaccagtcccaccagtgccagcatg
gctagcgcccatgcccaccgtggccccgccagccccatagtgggcgccattgagctcata
ccctctgtcaccaacccagagaacctgccctgcctaccagacatccctcccattcagctg
gaagacgcaggctccagcagtctggacgccctcctgagtcgctggatctcagccagcaca
taccctcagctgggcttgtggccccccgtggacatgaacccctcccccggactctccaca
cactcacctggctcctcaggcttatcaaactcccacacgcccgtgcggccatccagtact
tccagcacaggaagcaggggcagctgtggctctgcggggaggccagtgccagcgagcgcc
ccaatggaacagcaggtcaaagtcaagcaggagcccggaatcgagaaggagtgtggcttc
tcaggaaccaccacctccaacgtcaaaacggaacgagggaaggatggagggaggagcgcg
tgcatgatgagtagtccagagatcagccggactccccctctccccgtgctgggctctgtg
gcttccgcctcctctgtccaggacgccctcaagaagttgggggagcacgtcaaaactgag
ccccaagaccaggaggcctgcagcggggccaacgggcctagcaaagcccctagcattagc
ccatccactaagccctcagacgccccgctgaccaacagcaagggagccgggcctgctacc
ctgcgaactccacgcactgcaatggggaccaaccagagcggggcgggagggaaggatgac
gaccccaacgaggactggtgtgctgtgtgcaacaacgggggagagctgctttgctgtgac
cgctgccccaaagtcttccacatcacctgtcacatccccaccttgaagtgctccccgagt
ggagagtggatgtgcacgttctgccggagcctggccagcccggagttggagtacgagcct
gacgacgagcctcgtagcgagaaagacaccagtgagaagggcctgagtcctgaggaccag
aggaggtgtgagcgtctcctgctgaacgttttctgccatgagctcagcgaggggttccag
gagcctgtccctccctctatccctaattactacaaaatcatcaagaagcccatggacttg
accctggtgaaacagaagctacagttgaagcacgtccaacactaccagagccccatagag
tttgtctcggacgtgcgcctggtcttcagcaactgtgccaaatacaacgagatgtctcga
ataatccaggtatatgatgaggagaaacagagtaatgtgcaggcggactcagaggtggcg
caggcagggaaagccgtgagtttgtactttgaggagaggctgctggagctatacccagac
gaaagtttccccgaggtaccagaggagcctgaggccccagttggagagggagaggaggca
gatctcacagaagactcagaggatgagtttgtgcagcctaaacgcaagcggttaaaaaca
gatgaaaatatgcttcacatcaagtga
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