Salvelinus namaycush (lake trout): 120060168
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Entry
120060168 CDS
T07522
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120060168
Enzymes [BR:
snh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
120060168
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
120060168
REST complex
120060168
Histone demethylases
120060168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
FAD_oxidored
Pyr_redox_3
FAD_binding_3
Thi4
Lycopene_cycl
2-Hacid_dh_C
NAD_binding_9
GIDA
MurD-like_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
120060168
NCBI-ProteinID:
XP_038865218
UniProt:
A0A8U1GVJ0
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Position
Sna15:complement(8788805..8815300)
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AA seq
859 aa
AA seq
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MDITRCPEKWLKQDKERPLSSSIMLSSKKSDAGTSSSASSSSSAAGGAERAPEAQATAQA
GAPASAPGPMEIKKKERASPSGEPGGPPLPHPPGLGGVDPDTAEGRRTSRRKRSKQVEYR
EMDESLANLSEDEYYSEEERNAKAEKERKQVIPPPAPPVEEEPDSEPEEPSGECVEGAAF
QSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATAQQLE
APYNSDTVLVHRIHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGGGVSGLAAARQLQS
FGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQK
CPLYEANGQAGERCTSVPKEKDEMVEQEFNRLLEATSYLSHQLDFNFLNNKPVSLGQALE
VVIQLQEKHVKDEQIEHWKKIVKTQEDLKELLNKMVGTKERVKELHQQHKEASEVKPPRD
ITAEFLVKSKHRDLTALCKEYDELVESQVKLEEKLQELEANPPSDVYLSSRDRQILDWHF
ANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQV
RYTASGCEVIAVNTRSTTQTFIYKCDAVLCTLPLGVMKQQPPAVQFVPPLPEWKTAAIQR
MGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALMAGEAAG
IMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVTRWRADPWARGSYSYVAAGSSGNDY
DLMAQPITPGPAIPGASQPVPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM
YTLPRQATPTAAPQPSPSV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatattaccaggtgcccggagaaatggttaaaacaagacaaggagagacctctgtct
tcctccattatgctgtcgagtaagaagtcggatgcaggtacctcttcttccgcatcttcc
tcctcctctgcggcagggggagctgaacgggcccctgaagcccaggctactgcccaggct
ggggcccctgcttcagcaccaggccccatggagatcaagaagaaagagcgggcctcccca
agcggggagcctggcggacccccgctgccccaccctcccggcctcgggggcgtggacccg
gacacggccgagggccgcaggacaagccgtcgcaagcgatcaaaacaggtggagtaccgc
gagatggacgaaagcctggccaatctgtctgaggacgaatactactcggaggaggagcgc
aacgccaaggcagaaaaagagagaaagcaggtgatcccaccgccggctccgcctgtggag
gaggagccggacagtgagcctgaggagccttctggtgagtgcgtggagggagctgcgttc
cagagccgcctcccacacgaccgcatgacctcccaggaggccgcctgcttcccggacatc
atcagcgggccccagcagacgcagaaggtgtttctgtacatccgcaaccgcacgctccaa
ctttggctcgataacccgaaaatccagctgaccttcgaagccacagcacagcaacttgaa
gcgccatacaacagtgatacagtgctggtgcacaggatacacagttacctggagagacat
ggcctcatcaactttggcatctacaagagagtcaagcctttgccaacgaagaagacgggg
aaggtaatcatcatcggagggggtgtgtctgggctggcggccgcgcggcagctgcagagc
ttcggcatggacgtgaccgtactggaggccagggaccgcgttggggggagagtggccacc
ttccggaagggcaactacgtggctgatctgggggccatggtggtgacaggactgggaggg
aatcccatggcagtggtcagtaagcaggtcaacatggagctggccaagattaaacagaag
tgccctctgtacgaagcgaacggtcaagctggcgaacgatgcacaagtgtgcccaaggag
aaggatgagatggtggagcaggagttcaaccgtctgttggaggccacctcctacctcagc
caccagctggacttcaacttcctcaacaacaagcctgtgtctctgggacaggccctggag
gtggtcattcagttgcaggagaaacatgtgaaagatgagcagatagagcactggaagaag
atagtcaagacccaagaggatctcaaggagctgttgaacaagatggtgggtaccaaggag
agggtcaaagagctgcatcagcagcacaaggaggccagcgaggtcaagccccccagagac
atcaccgctgagttcctggtcaagagcaagcaccgcgacctgaccgcactctgcaaggag
tatgatgagctggtggagtcgcaggtcaaactggaggagaagctccaggagctagaggcc
aacccacccagtgacgtgtacctgtcgtcccgggacagacagatcctcgactggcacttt
gccaacctggagtttgccaacgccacacccctctccaccctctcgctcaagcactgggac
caggacgatgactttgagttcacaggcagccacctgacagtgaggaacggctactcctgt
gtccccgtggctctggccgagggcctggacatcaaactgaacactgcagtacgacaggtc
cgatacacagcctctggctgtgaggtgatagcagtcaacacgcgctccaccacccagacg
ttcatatacaagtgtgacgcggtgctgtgcaccctacccctgggtgtcatgaaacaacag
ccccccgccgtgcagtttgttccccccctgcccgagtggaagaccgcagctatccagagg
atgggctttggaaacctcaacaaggtggtgctgtgttttgaccgtgtgttctgggacccc
agtgtgaacctgtttggccatgtgggcagcactacagccagcaggggagaactcttcctc
ttctggaacctttacaaagcccccatactgctggcgctgatggccggagaggcggccggc
atcatggagaacatcagcgacgacgtcattgtcggacgctgcctcgccatcctcaaaggt
atcttcggaagcagcgcagtacctcagcccaaggaaacggtggtgacgcgttggcgtgcc
gacccctgggcgcggggctcctactcgtacgtggcggccggttcctccggtaacgactat
gatctcatggcccagcccatcacccccggccccgccatccccggagcgtcacagcccgtc
ccacgtctgttcttcgccggcgagcacacgatccgcaactacccggccacggtgcacggc
gctttgctcagcggcctgcgagaggcgggacgcatcgccgaccagttcctgggcgccatg
tacaccctcccccgacaagccacgcccactgccgcccctcagccctcccccagtgtctag
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