Streptococcus pneumoniae INV104 (serotype 1): INV104_17020
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Entry
INV104_17020 CDS
T02072
Name
(GenBank) putative 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sni
Streptococcus pneumoniae INV104 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sni03019
]
INV104_17020
Messenger RNA biogenesis [BR:
sni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
INV104_17020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CBW37383
LinkDB
All DBs
Position
complement(1862164..1863105)
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AA seq
313 aa
AA seq
DB search
MKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIDGKLWDAQPHNIEAFT
AGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADFKVKSPVDVKEIRDYMSQMIFK
IENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVYPQLN
KSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDTKEEV
VLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMTNKIF
AMDNRSFYKPDLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtcacatgaaaaaagatgagctatttgaaggcttttacctaatcaaatca
gctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagatgat
agtggcgagattgatgggaagctctgggatgcccaacctcataacattgaggcctttacc
gcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaatacccctcaagtc
aatcaaattactctccgcctgcctcaagctggtgaacccaatgacccagccgatttcaag
gtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaaatgattttcaaa
attgaaaatcctgtctggcaacggattgtccgaaatctctacaccaagtatgataaggaa
ttctactcctatccagctgccaagaccaaccaccatgcctttgaaacggggttggcttat
catacggcgaccatggtacgtttggcagacgctattagcgaagtttatcctcagctcaat
aagagcctgctctatgcggggattatgctgcatgacttagctaaggttatcgagttgacg
gggccagaccagacagagtacacagtgcgaggtaatcttcttggacatatcgctctcatt
gatagcgaaattaccaagacagttatggaactcggcatcgatgataccaaggaagaagtc
gttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatatggaagtccagtc
cgtccacgtattatggaggcagagattatccatatgattgacaatctggatgcaagcatg
atgatgatgtcaacagctctggctttggtggataaaggagagatgaccaataaaatcttc
gctatggataatcgttccttctataaaccagatttagattga
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