Sphingomonas sp. NIC1: A7E77_09225
Help
Entry
A7E77_09225 CDS
T04479
Name
(GenBank) ATP-dependent DNA ligase
Organism
snj
Sphingomonas sp. NIC1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
DUF2399
Motif
Other DBs
NCBI-ProteinID:
ANC87060
LinkDB
All DBs
Position
complement(1926898..1928493)
Genome browser
AA seq
531 aa
AA seq
DB search
MQAFAALLDSLIYTRGRNAKLKLIVDYLHATPDPDRGWAMAALTGDLDLPGVKPAQIRAL
IEARVDPVLFRMSRDYVGDTAETVALLWPAPVVPPPDTGPLSITAAVDALRHLSRSDAPA
VLAGMLDRLDAEERFALLKMATGGLRIGVSARLAKTALAQAFGLDVDAVEEVWHGLSPPY
ASLFAWAEGKGAQPTPADVPVFRPFMLAHGLEDAQVDLADYAAEWKWDGIRVQIVHVAGQ
TRLYSRTGDDVTGSFPDVAAAFTTPGTVDGELLVKGEFQGGALDDGGGAASFNALQQRLG
RKQVSAKMLADYPAFVRLYDILFDGPEDLRALPWTERRDRLEAFVPRLDPDRFDLSQVIA
ADSFTDLEAIRAGARDAAIEGVMLKRRDSPYVGGRRAGLWYKWKRDPLTADCVMMYAQRG
NGRRSSYYSDYTFGCWTEEGELLPVGKAYSGITDEELRMLDSFVRRHTVKRFGPVREVEK
TLVLEIAFDSIHTSTRHKSGVAMRFPRIARIRTDKPAAEADQVETLRRLVT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttgccgcgcttctcgattcgctgatctacacgcgggggcggaacgcgaag
ctcaagctgatcgtcgattatctgcacgcgacgcccgatcccgatcgcggctgggcgatg
gcggcactgaccggcgatctcgatctgcccggcgtgaagccggcgcagatccgggcgctg
atcgaggcgcgggtcgaccccgtgctgttccggatgagccgcgactatgtcggcgatacg
gccgagacggtggcgctgctatggccagcgccagtggtgccgccgcccgataccggtccg
ctgtcgatcaccgctgcggtcgacgcgctgcgccatctatcgcgctccgatgcgcccgct
gtgctcgccggcatgctcgaccggctggatgcggaagagcggttcgcgctgctcaagatg
gcgaccgggggcctgcgtatcggcgtgtcggcgcggctcgccaagaccgcgctggcgcag
gcgttcgggctggacgtcgatgcggtggaggaggtgtggcacggcctgtcgccgccctat
gccagcctgttcgcctgggcggagggaaagggcgcgcaaccgaccccggcggacgtgccg
gtcttccgccccttcatgctcgcgcacgggctggaggacgcgcaggtcgacctcgccgat
tatgccgccgagtggaaatgggacggcatccgcgtccagatcgtccatgtcgcgggccag
acgcgcctgtacagccgcaccggcgacgacgtgacgggcagctttcccgacgtcgccgcg
gccttcaccacccccggcacggtcgatggcgagctgctggtaaagggcgaattccagggc
ggtgcgctggacgacggtggtggggcggcgagcttcaacgcgctgcaacagcggctggga
cgcaagcaggtgtcggcgaagatgctggccgactatcccgcgttcgtccgcctctacgac
atcctgttcgacgggcccgaggatctgcgggcgctaccttggacggagcggcgcgaccgg
ctggaggcgttcgtgccgcggctcgatcccgatcgcttcgacctcagccaggtgatcgcg
gccgacagcttcaccgatttggaggcgatccgcgccggtgcgcgcgatgcggcgatcgag
ggcgtgatgctgaaacgccgcgacagcccctatgtcggcgggcggcgcgccggcctgtgg
tacaaatggaagcgcgatccgctgaccgccgattgcgtgatgatgtacgcgcagcgcggc
aacgggcgccgatcgtcctattacagcgactataccttcggctgctggaccgaagagggt
gagctgctgccggtcggcaaggcctattcggggatcaccgacgaggaattgcgcatgctg
gacagcttcgtccgccgccatacggtgaagcgcttcggcccggtacgcgaagtggagaaa
acgctggtgctggagatcgcgttcgattcgatccacacctccacgcggcataagtccggc
gtcgcgatgcgcttccctcgcatcgcacgcatccgcaccgacaagcccgcggcagaggcg
gatcaggtcgaaacgctgcggcggctggtgacgtaa
DBGET
integrated database retrieval system
