Streptomyces nitrosporeus: CP967_08085
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Entry
CP967_08085 CDS
T06889
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snk
Streptomyces nitrosporeus
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snk03016
]
CP967_08085 (truB)
Enzymes [BR:
snk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CP967_08085 (truB)
Transfer RNA biogenesis [BR:
snk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CP967_08085 (truB)
Prokaryotic type
CP967_08085 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QEU71930
UniProt:
A0A5J6FAG2
LinkDB
All DBs
Position
complement(1906512..1907411)
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AA seq
299 aa
AA seq
DB search
MTQQNRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQNTVTDDAEGEITSSADASAVTREGIDAGVAALTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFRVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGIDAARTLDQHQEELTVMPVAEAAA
SAFPRWDVDEKRARLLLNGVRLDMPAYPPGPVGVFGPDGAFLVLVEEQKGKARSLAVFA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcagaacaggacgccggacggcttggtcatcgtcgacaagccgtccggcttc
acctcgcacgacgtggtggccaagatgcgggggatcgcccgcacccgccgggtcggccac
gcaggcacgctggaccccatggcgaccggtgtgctggtgctcggtgtcgagcgggccacc
aagctgctcggccatctcgccctgaccgagaaggagtacctcggtacgatccggctcggc
cagaacaccgtcaccgacgacgcggagggcgagatcacctcgtccgccgacgcctcggcg
gtgacccgtgagggcatcgacgccggggtcgcggcgctgaccggggcgatcatgcaggtg
ccctccaaggtcagcgccatcaagatcgacggcaaacggtcgtacgcgcgggtgcgcggc
ggtgaggagttcgagatcccggcccgtccggtgaccgtctcctccttccgcgtctacgac
gtgcgcgaggcggtcgcggaggacggcacccccgtcctcgacctggtcgtctcggtcgtc
tgctcctcgggcacgtacatccgcgccctggcccgcgacctcggtgccgggctcggcgtc
ggcggccacctgaccgcgctgcggcgcacccgggtggggccgtacgggatcgacgcggcc
cggaccctggaccagcaccaggaggagctgaccgtcatgccggtcgccgaggcggccgcg
tccgcgttcccccgctgggacgtggacgagaagcgggccaggctgctgctcaacggcgta
cggctggacatgccggcctacccgccggggccggtgggggtcttcgggccggacggggcg
ttcctggtgctcgtcgaggagcagaagggcaaggccaggagcctcgccgtcttcgcctga
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