Ancylobacter novellus: Snov_2556
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Entry
Snov_2556 CDS
T01258
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K02438
glycogen debranching enzyme [EC:
3.2.1.196
]
Organism
sno
Ancylobacter novellus
Pathway
sno00500
Starch and sucrose metabolism
sno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Snov_2556
Enzymes [BR:
sno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.196 limit dextrin alpha-1,6-maltotetraose-hydrolase
Snov_2556
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
ACPS
Motif
Other DBs
NCBI-ProteinID:
ADH89851
UniProt:
D7A4I8
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All DBs
Position
complement(2672502..2676644)
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AA seq
1380 aa
AA seq
DB search
MSDPGVSPGRHEPLGVTADALGVNVAVFSANAERIEFCLFDAAGEKEIARIALPGRTGDV
FHGHIVGVPPGARYGLRAAGPWAPSSGHRFNPHKLLVDPYASRLDRPFRLDVSMFDVRAL
GADRDETDSAAVVPKAIVPQPEGTAPRAALPFRWDGEVLYELNVRGFTKRHEAIPLNMRG
TFAALAQPPALDHLVKLGITTVELMPSMAWVDERHLPPLGLTNYWGYNPVAFGAPDPRLA
PGGFEDVALAIEALHGAGIRVVLDVVLNHTGESDELGPTVSLRGLDNATYYRHAKDNPAR
LINDAGTGNTLALEHAPVLRLGMDMLRRWAALGLDGFRFDLAVTLGRRPDGFDMEAPFLA
ALQQDPMLRDLALIAEPWDIGLGGYQVGQFPPNWGEWNDRFRDTARRFWRGEAGMVGELA
TRLAGSADIFGARRRPLSRGINFVTAHDGFTLADLVSFERKHNEANGEQDRDGTGDNHSW
NHGVEGWTEDAGIMAARRADMRALLATLLIARGTPMLTMGDERGRSQAGNNNAYAQDNEL
TWLDWSKTDEDLAAFTAKLVKLRLAHRALRLEAPLAGHPLDASGIADVEWRAPDGGAPHW
DDGSTRALVAVFYAPPGEEEPADRVAVALNASDEALALQLPAPRDGFIWQVAADTAQPDG
EGGARDSLAARSVLVLVEAPTPDPPRLPTDPAVLETLAAAAGIANEWWDVEGTHHPVGDD
TKRALLAALHLPAGTTGEARDSLAELSEQRFSRDLPFVRVLRSGEAPSLTLAGAAADAVR
RLDFVIRLEDGGEFDFSVHPEEGRREVATRPDGRRALICTIGLPALPVGRHTLMLGETAC
LVTVAPHACHLPPELAAGGRLTGIGTHLYTLRRAVLDQGIGDFTALGELGALAAGQGVSV
LGLNPLHALFPDDRERASPYSPSDRRFLDPIYIDVAALGADTAPFAVLSAKEAVDYTGVW
AAKQAALKAAFAAFRSDADFDRFVTEGGEALRRFAIHQAISAEYPGKGWRDWPGGLSDVD
SPAVESFAGKNSEAVRFALWQQWVADRQFAAAAERARAGALSLGFYRDLAVGTAPDGAEA
WSEASMLMQGVSIGAPPDPLGPEGQNWNLPPFDPLALQRDGYRGFAELVRANMRHAGALR
IDHVMGLRRLFLIPHGASGAEGAYLAMPFRGLAGQVALESTRAKCLVVGEDLGTVPFGMR
EHLADERMLSYRVLWFERQGEDFAPPSAYPALAAACVSTHDLPTLAGWWQGVDIEERRAL
GLEDEASVETALAERAREREELGEALLKEGLIAALPAPDAPLDDEFLAAVHGFIARTPSM
LALAQLDDLAGETVAVNLPGTDRERPNWRRRLSRPIEEAMESNRARAALAAMAKERGAKS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatccgggcgtttcgccgggtcgtcacgagccgctgggcgtcacggcggacgcc
ttgggggtcaatgtcgcggtattctcggccaatgccgagcgcatcgagttctgcctgttc
gacgcggcgggcgagaaagagatcgcccgtattgcgctgccgggacgcacaggggacgtg
ttccacggccatatcgtcggtgtgccacccggcgcacgctacggcctgcgcgcggcgggg
ccgtgggcgccgtccagcggccaccgcttcaatccccacaagttgctggtcgatccctat
gccagccggctcgaccggccgttccggctcgacgtcagtatgttcgacgtccgcgctctt
ggtgccgaccgtgacgagaccgacagcgcggcggtagttccgaaggcgatcgtgccgcag
ccggagggcacggcgccacgcgcggcactgccgttccgctgggacggcgaagtgctctac
gagctgaatgtgcgcggcttcaccaagcgccacgaggcaattccactcaatatgcgcggc
actttcgcggcgctggcgcagccgccggcgctcgaccatctggtgaagctcggcatcacc
acggtcgagctcatgccgtccatggcgtgggtcgacgagcggcatttgccgccactcggg
ctgacaaattactggggctacaacccggtggcgttcggcgcgccggatccgcgccttgcg
cccggcggcttcgaggacgtggcgctcgctatcgaggcgctgcacggcgccggcatccgg
gtcgtgctcgacgtggtgctgaaccacaccggcgagagcgacgaactcgggccgacggtg
agcctgcgcggtctcgacaacgccacctattaccgccacgccaaggacaatccggcgcgc
ctgatcaacgacgccggcaccggcaacacgctggcgctggagcacgcgccggtgctgcgc
ctcggcatggacatgctgcggcgctgggcagcgctcggcctcgacggcttccgcttcgat
cttgcggtgacgctcggccggcggccggatggcttcgacatggaggcgcctttcctcgcc
gcgctccagcaggatccgatgctgcgcgacctcgcgctcatcgccgagccctgggatatc
gggctgggcggctaccaggtcgggcagttcccgccgaactggggcgagtggaacgaccgc
ttccgcgacacggcgcggcgcttctggcgcggcgaggcgggcatggtgggagagcttgcc
acgcggctcgccggctcggccgacatcttcggcgcgcggcgccggccgctgtcgcgcggc
atcaacttcgtcaccgcgcatgacggcttcacgctcgccgacctcgtctccttcgagcgc
aagcacaatgaggccaatggcgagcaggaccgcgacggcaccggcgacaatcacagttgg
aaccacggcgtcgagggctggaccgaggatgccgggatcatggcggcgcgccgcgccgac
atgcgggcgctgctggcgacgctgctgatcgcccgcggcacacccatgctgaccatggga
gacgagcgcggccgctcgcaggccggcaacaacaacgcctatgcgcaggacaacgagctg
acctggctcgactggtcgaaaaccgacgaggacctcgccgccttcaccgcgaagctggtg
aagctgcgcctcgcccatcgcgcgctgcggctggaggcgccgctggccggccatccgctc
gacgccagcggcatcgccgacgtcgagtggcgcgcgccggatggcggcgcgccgcattgg
gacgatgggtccacgcgggcgctggtggcggtgttctacgcgccgccgggcgaggaggag
cccgccgaccgtgtggcggtggcgctcaacgcctcggacgaggcgctggcgctgcaattg
ccggcgccgcgcgacggcttcatctggcaggtcgccgccgacacggcgcagcccgatggt
gagggcggtgcacgcgacagtctcgccgcccgctcggtgctggtgctcgtcgaggcaccg
acaccggacccgccgcgcctgccgaccgatcccgctgtgctggagacgctcgccgccgcc
gccggcatcgccaatgaatggtgggacgtcgagggcacgcatcacccggtcggcgacgac
accaagcgcgcactgcttgccgctctgcatctgccggccgggaccaccggcgaggcgcgc
gacagcctggcggagctgtcggagcagcgcttcagccgcgacctgcccttcgtccgcgtg
ctgcgcagcggcgaggcaccgagcctgaccctcgcgggggcggccgccgacgcggtgcgg
cggctcgatttcgtcatccggctggaggatggcggcgagttcgacttctccgtgcatccg
gaggaggggcggcgggaggtggcgacgcggccggacgggcggcgcgccttaatctgcacc
atcggcctgccggcgcttccggtcggccgccacacgctcatgctgggcgagaccgcctgc
ctcgtcaccgtcgcgccgcacgcctgccatctgccgcccgaactcgcggccggcgggcgg
ctgaccggtatcggtacgcatctctacacgctgcgccgcgcggtgctcgatcagggcatc
ggcgacttcaccgcgctgggcgaactcggcgcgctggcggcggggcagggcgtgtcggtg
ctgggcctcaacccgctgcacgcgctgttccccgacgaccgggagcgggcgagcccctat
tcgccctccgaccggcgcttcctcgatccgatctatatcgacgtcgccgcgctcggcgcc
gatacggcgccctttgccgtgctctcggccaaggaggcggtggattacaccggcgtctgg
gcggcgaagcaggcggcgctgaaggcggccttcgccgcgttccgctccgacgcggatttc
gaccgcttcgtcacggaaggtggcgaggcgctgcgccgcttcgccatccatcaggcgatc
tcggccgaatatccgggcaagggctggcgcgactggccgggcggcctgagcgatgtcgat
agcccggcggtcgaaagctttgccggcaaaaattctgaggcggtgcgcttcgcgctgtgg
cagcaatgggtggccgaccggcaatttgcggccgctgccgagcgggcgcgggcgggcgct
ctctcgctcggcttctaccgcgaccttgccgtcggtactgcgccggacggggcggaggcc
tggtcggaagcttccatgctgatgcagggtgtgagcatcggcgcgccgcccgatccgctg
gggccggaggggcagaactggaacctgccgcccttcgatccgctcgccttgcagcgcgac
ggctaccgcggcttcgcggagctggtgcgggcgaatatgcgccatgccggggcgctcagg
atcgaccatgtgatgggcctgcgccggctcttcctcatcccgcatggggcgagcggcgcg
gaaggcgcctatctcgccatgcccttcagagggctggccggacaggtggcgctggagagc
acgcgggcgaagtgcctcgtggtcggcgaggacctcggcaccgtgcccttcggcatgcgc
gagcatctcgccgacgagcgcatgctgtcctaccgcgtgctgtggttcgagcggcaaggc
gaggatttcgcgccgccctccgcttatccggcgctggcggcggcctgcgtgtcgacgcat
gacctgccaacgctcgccggctggtggcagggcgtcgatatcgaggagcgccgcgcgctc
gggttggaggatgaggcgagcgtcgagacggcgctggccgagcgcgcccgcgagcgcgaa
gaactgggcgaggcgctgctcaaggaagggctgatcgcggcgctgccggcgcccgacgcg
ccgctggacgacgaattcctcgccgcggtgcacggcttcatcgctcgtaccccgtccatg
ctggcgctggcacagctcgacgatcttgcgggagaaacggtggcggtgaacctgccgggc
accgaccgcgagcggcccaactggcggcgccggctgtcgcgtccgatcgaggaagcgatg
gagagcaatcgcgcccgcgccgcgctcgccgccatggcgaaggagcgcggcgcgaaatcc
tga
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