KEGG   Streptomyces nodosus: CP978_24580
Entry
CP978_24580       CDS       T06839                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
snq  Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:snq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:snq03016]
    CP978_24580 (truB)
Enzymes [BR:snq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CP978_24580 (truB)
Transfer RNA biogenesis [BR:snq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CP978_24580 (truB)
 Prokaryotic type
    CP978_24580 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: QEV41311
UniProt: A0A0B5DQI2
LinkDB
Position
5448795..5449700
AA seq 301 aa
MTQQHTPPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYVGTVRLGQNTVTDDAEGEIISSTDASEVTRDLIDAGIAKLTGDILQV
PSKVSAIKINGVRSYKRARDGEDFEIPARPVTVSSFALYDVREAVAEDGTPVLDLLVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLESARTLDQLQEELTVMPVAEAAV
AAFPRWDLDAKRVRLLANGVRLEMPDLYAGRGPVAVFGPEGEFVALVEAQKGKARSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagcagcacaccccgcccgacggcctcgtcatcgtcgacaagccgtcgggcttc
acgtcgcacgacgtcgtcgccaagatgcgcgggatcgccaggacacggcgggtcggccat
gccggcacgctcgacccgatggcgaccggcgtgctcgtcctcggcgtggagagggccacc
aagcttctcggccacctcgccctgaccgagaaggagtacgtggggaccgtccggctcgga
cagaacaccgtcacggacgacgccgagggggagatcatttcctccaccgacgcctccgag
gtcacccgggacctgatcgacgccgggatcgccaagctgaccggggacatcctccaggtg
ccctccaaggtcagcgccatcaagatcaacggtgtgcgctcctacaagcgggcacgtgac
ggcgaggacttcgagatccccgcccggccggtcaccgtctcctccttcgccctgtacgac
gtgcgggaggcggtcgccgaggacggcaccccggtgctcgacctgctggtctccgtggtc
tgctcctccggcacctatatccgggccctcgcccgggacctgggcgcggacctcggcgtc
ggcggccatctcaccgcactgcggcgcactcgggtcgggccctacaagctcgaatccgcc
cgcacgctggaccagctccaggaggagctgaccgtgatgccggtcgccgaggccgccgtg
gccgcgttcccgcgctgggacctggacgccaagcgggtccggctgctcgccaacggagtg
cgcctggagatgcccgacctctacgccggccgcggccccgtcgccgtcttcggccccgag
ggcgagttcgtcgcgctcgtggaggcccagaagggcaaggcacggagcctggccgtgttc
ggctga

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