Streptomyces nigra: DC008_23470
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Entry
DC008_23470 CDS
T05839
Symbol
kgd
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
snz
Streptomyces nigra
Pathway
snz00020
Citrate cycle (TCA cycle)
snz00630
Glyoxylate and dicarboxylate metabolism
snz00785
Lipoic acid metabolism
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01120
Microbial metabolism in diverse environments
snz01200
Carbon metabolism
snz01210
2-Oxocarboxylic acid metabolism
Module
snz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DC008_23470 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
DC008_23470 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DC008_23470 (kgd)
Enzymes [BR:
snz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DC008_23470 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
DC008_23470 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
DC008_23470 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
DC008_23470 (kgd)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AWE52361
UniProt:
A0A2S1IIA7
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All DBs
Position
complement(5026625..5030410)
Genome browser
AA seq
1261 aa
AA seq
DB search
MSPQSPSNASSISTDADQAGKNPAAAFGANEWLVDEIYQQYLQDPNSVDRAWWDFFADYK
PGAAAAPAPAGTAAAGAAETTTAPADASVPAPAPAAPKPAAAAPAKAAAPAAPAPAKPAA
APAAKPAQPKKAEPAAAPADGPEFVTLRGPSAAVAKNMNASLELPTATSVRAVPVKLLFD
NRIVINNHLKRARGGKISFTHLIGYAMVQAIKAMPSMNYSFGEKDGKPTLVKPAHVNLGL
AIDLVKPNGDRQLVVAAIKKAETLNFFEFWQAYEDIVRRARDGKLTMDDFTGVTVSLTNP
GGLGTVHSVPRLMPGQSVIMGVGAMDYPAEFQGTSQDTLNKLGISKVMTLTSTYDHRVIQ
GAASGEFLRQVANLLLGENGFYDDIFEALRIPYEPVRWLKDIDASHDDDVTKAARVFELI
HSYRVRGHVMADTDPLEYRQRKHPDLDITEHGLTLWDLEREFAVGGFSGKSLMKLRDILG
VLRDSYCRTTGIEFMHIQDPKQRKWIQDRIERPHSKPEREEQLRILRRLNAAEAFETFLQ
TKYVGQKRFSLEGGESVIPLLDAVLDSAAESRLDEVVIGMAHRGRLNVLANIVGKSYAQI
FREFEGNLDPKSMHGSGDVKYHLGAEGTFTGLDGEQIKVSLTANPSHLEAVDPVLEGVAR
AKQDIINKGGTDFTVLPIALHGDAAFAGQGVVAETLNMSQLRGYRTGGTVHVVINNQVGF
TAAPESSRSSMYATDVARMIEAPIFHVNGDDPEAVVRVARLAFEFRQAFNKDVVIDLICY
RRRGHNESDNPAFTQPLMYDLIDKKRSVRKLYTESLIGRGDITLEEAEQALQDYQGQLEK
VFTEVREATAQPTAAEPTDPQAEFPVAVNTAVTTEVVKRIAESQVNIPDHVTVHPRLLPQ
LQRRASMVEDGTIDWGMGETLAVGSLLLEGVPVRLAGQDSQRGTFGQRHAVIIDNKTGEE
YTPLQYLSEDQARYNVYNSLLSEYAAMGFEYGYSLARPEALVMWEAQFGDFVNGAQTVVD
EFISSAEQKWAQTSGVVLLLPHGYEGQGPDHSSARPERFLQMCAQNNMTVAMPTSPSNYF
HLLRWQVHNPHHKPLVVFTPKSMLRLKAAASKAEEFTTGQFQPVIGDASVDPAAVKKVVF
CAGKVYYDLEAERKKRGVTDTAIIRIERLYPLPGTELQAEIKKYPNAEKYLWAQEEPANQ
GAWPFIALNLIDHLDLAVGADVPHGERLRRISRPHSSSPAVGSAKRHQAEQEQLVREVFE
A
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccacagtcccccagtaacgcatcgagcatctcgaccgacgcggaccaagcgggc
aagaaccccgctgccgcgttcggcgccaacgagtggctcgtcgacgagatctatcagcag
tacctccaggacccgaattcggtagaccgcgcctggtgggacttcttcgccgactacaag
ccgggggctgccgccgccccggctccggcgggtaccgcggccgcgggggccgcggagacc
accaccgctccggccgacgcgtcggtcccggcgcccgctcccgcggccccgaagccggcg
gccgcagccccggccaaggccgccgcgcccgccgctccggcgccggcgaagcccgccgcg
gccccggccgccaagccggcccagccgaagaaggccgagcccgccgccgcccccgcggac
ggccccgagttcgtgacgctgcgcggcccctccgccgcggtggccaagaacatgaacgcc
tcgctggagctgccgaccgccacctcggtccgcgcggtcccggtgaagctgctgttcgac
aaccgcatcgtcatcaacaaccacctcaagcgggcccggggcgggaagatctccttcacg
cacctgatcggctacgcgatggtgcaggccatcaaggccatgccgtcgatgaactactcg
ttcggcgagaaggacggcaagccgaccctcgtcaagccggcgcacgtcaacctcggcctc
gccatcgacctggtcaagcccaacggcgaccgccagctcgtcgtcgcggcgatcaagaag
gccgagacgctgaacttcttcgagttctggcaggcctacgaggacatcgtccgccgcgcc
cgcgacggcaagctgacgatggacgacttcaccggtgtcacggtctccctgaccaacccc
ggcggcctgggcaccgtgcactccgtgccgcgcctgatgcccggccagtccgtgatcatg
ggcgtcggcgccatggactacccggcggagttccagggcacctcgcaggacaccctgaac
aagctcggcatctcgaaggtcatgacgctcacgtcgacctacgaccaccgggtcatccag
ggcgccgcctccggcgagttcctgcgccaggtcgcgaacctgctgctcggcgagaacggc
ttctacgacgacatcttcgaggccctgcggatcccctacgagccggtccgctggctcaag
gacatcgacgccagccacgacgacgacgtcaccaaggccgcccgggtcttcgagctgatc
cactcctaccgggtccgcggccacgtcatggccgacaccgacccgctggagtaccgccag
cgcaagcaccccgacctcgacatcaccgagcacggcctcaccctgtgggacctggagcgc
gagttcgcggtcggcggcttctcgggcaagtccctgatgaagctgcgcgacatcctcggc
gtgctgcgcgactcgtactgccgcaccaccggcatcgagttcatgcacatccaggacccc
aagcagcgcaagtggatccaggaccgcatcgagcgcccgcactccaagccggagcgcgag
gagcagctgcggatcctgcgccggctgaacgccgcggaggccttcgagaccttcctgcag
acgaagtacgtcggccagaagcgcttctccctggagggcggcgagtccgtcatcccgctg
ctcgacgcggtgctggactcggctgccgagtcccgcctcgacgaggtcgtcatcggcatg
gcccaccgcggccggctgaacgtcctggcgaacatcgtcggcaagtcgtacgcgcagatc
ttccgcgagttcgagggcaacctcgacccgaagtcgatgcacggctccggtgacgtgaag
taccacctgggcgccgagggcaccttcaccggcctggacggcgagcagatcaaggtctcg
ctcaccgccaacccctcccacctggaggcggtcgacccggtcctggagggcgtcgcccgc
gccaagcaggacatcatcaacaagggcggcacggacttcaccgtcctgccgatcgccctg
cacggcgacgcggccttcgcgggccagggtgtcgtcgccgagacgctgaacatgtcgcag
ctgcgcggctaccgcaccggcggcaccgtccacgtcgtcatcaacaaccaggtcggcttc
accgcggcccccgagtcctcgcgttcctccatgtacgcgacggacgtggcccgcatgatc
gaggccccgatcttccacgtgaacggcgacgaccccgaggccgtcgtccgcgtcgcgcgg
ctggccttcgagttccgtcaggcgttcaacaaggacgtcgtgatcgacctcatctgctac
cgccgccgcggtcacaacgagtcggacaacccggccttcacccagccgctgatgtacgac
ctgatcgacaagaagcgctcggtgcgcaagctctacaccgagtccctgatcggtcgcggc
gacatcaccctggaagaggccgagcaggcgctgcaggactaccagggccagctggagaag
gtcttcacggaggtccgcgaggccaccgcgcagccgaccgccgccgagcccacggacccg
caggccgagttcccggtcgccgtgaacaccgcggtgaccacggaggtcgtcaagcggatc
gccgagtcccaggtcaacatccccgaccatgtcaccgtccacccgcgtctgctgccccag
ctgcagcgccgggcgtcgatggtcgaggacggcaccatcgactggggcatgggcgagact
ctcgcggtcggctccctcctgctcgagggcgtcccggtccggctcgccggccaggactcg
cagcgcggcaccttcggccagcgccacgcggtgatcatcgacaacaagacgggcgaggag
tacacgccgctccagtacctctccgaggaccaggcgcggtacaacgtgtacaactccctg
ctgtccgagtacgcggcgatgggcttcgagtacggctactcgctcgcccgccccgaggcg
ctcgtgatgtgggaggcgcagttcggcgacttcgtcaacggcgcgcagacggtcgtggac
gagttcatctcgtcggccgagcagaagtgggcccagacctccggtgtggtcctgctcctg
ccgcacggctacgagggccagggtccggaccactcctcggcccgcccggagcgcttcctc
cagatgtgcgcgcagaacaacatgacggtcgccatgccgacgtcgccgtcgaactacttc
cacctcctgcggtggcaggtgcacaacccgcaccacaagccgctggtcgtcttcaccccg
aagtcgatgctgcgcctcaaggccgccgcgtcgaaggcggaggagttcaccaccgggcag
ttccagccggtcatcggcgacgcgtcggtcgacccggccgccgtcaagaaggtcgtcttc
tgcgccggcaaggtctactacgacctggaggccgagcggaagaagcgcggcgtcacggac
acggcgatcatccgcatcgagcgcctgtacccgctgccgggcaccgagctccaggcggag
atcaagaagtacccgaacgccgagaagtacctgtgggcccaggaggagccggcgaaccag
ggtgcgtggccgttcatcgcgctcaacctgatcgaccacctggacctcgcggtcggtgcc
gacgtcccgcacggcgagcgcctgcgccgcatctcgcgtccgcactcctcgtccccggcc
gtcggttccgccaagcggcaccaggccgagcaggagcagctggtgcgtgaggtgttcgag
gcctga
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