Solenopsis invicta (red fire ant): 105198570
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Entry
105198570 CDS
T03916
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105198570
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105198570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
DUF1416
Motif
Other DBs
NCBI-GeneID:
105198570
NCBI-ProteinID:
XP_011163624
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Position
5:complement(16082842..16086015)
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AA seq
579 aa
AA seq
DB search
MAPTIQTNSNQAERDKRAVRPVEKRSELICRVKYCNTLPDIPFDPKFITYPFEPTRFIQY
NPTSLERNYKYEVLTEHDLGVEIDLINKDTYAGDLNGQLDPADEKLLEEDVLTPQDSKRS
RHHARSVSWLRRTEYISTESTRFQPQTADKVEAKVGYSIKKNFKEETLYMDRESQIKAIE
KTFEDNKKPIERHYSKPNVVPVEILPVYPDFKLWKYPCAQVIFDSDPAPTGRSVPAQIEE
MSQAMIRGVMDESGEQFVAYFLPLEETLEKRRRDFTAGIDYADEEEYEYKMAREYNWNVK
SKASKGYEENYFLVMRQDGVYYNELETRVRLSKRRQKVGQQPNNTRLIVRHRPLNANEFR
MQRYREKQLEPPGEEDEDEEEEEEEEQETQQEDKADGKDMPVKGSEVENGEESRASSRAS
SRASSRKSRSHSRSRSKSGSRSRSRSKSRSRSKSRSRSRSRSRSHSRSRSRSRSRSRSRS
RSRSPSKSRSPSRSRSRSQSRSPSKSRSKSRSRSGSPQSRNTSRSRSKSKSRSRTPAKSP
SRSRSSSRSKSRSRSRSRSGTGSGSGSESASGESGSESE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcacctactatacaaacgaacagtaaccaagctgagagggacaaacgtgcagtcaga
ccagtggaaaaacgatctgagctcatatgcagagtgaagtattgcaacacattgccggat
atcccattcgatccgaaattcataacgtatccctttgaacccaccaggtttattcagtat
aatccaacctcgttagaacgcaattataaatatgaagtcttgacagaacacgatttaggt
gtagaaattgatttaattaataaagacacgtatgcgggagatctaaatggtcagttagat
ccagctgacgaaaagttgctcgaggaagatgttcttactccacaggattcaaaacgttct
cgacatcacgccaggagcgtgtcctggttgagacgtacagaatatatttccacagagagt
accagatttcagccgcaaacggcggacaaggttgaagctaaagttggttatagtatcaag
aagaactttaaggaggaaacgttgtatatggaccgcgagagtcaaataaaagctatagaa
aagacctttgaagacaataagaagccaattgaaagacactacagtaaaccaaacgtagta
cctgtagaaatattgcctgtatatccagactttaagttatggaaatatccgtgtgcgcaa
gtcatatttgattctgatcctgcgccaactggtcgatctgtaccagcacagatcgaagaa
atgtcacaagctatgatacgaggtgtgatggacgagagcggtgaacagtttgttgcttac
tttttgccgttggaagaaacgttggaaaagcgccgacgggactttacagctggtatcgac
tacgctgacgaggaggaatacgaatataaaatggcgagagagtacaattggaacgtcaag
agcaaagcttccaaaggatacgaagagaattatttccttgtgatgagacaagacggggtt
tactacaatgaactagaaacgcgcgtgcgactgagcaaacggcgccagaaggtaggacag
caaccaaacaacacgcgcttaatagtgcgtcaccgacccctgaacgctaatgaatttaga
atgcagagatatcgagaaaaacaattggagccgccgggagaggaggatgaggacgaagag
gaggaagaagaggaagaacaggaaactcaacaagaggataaggcagacgggaaagatatg
ccggttaaaggttctgaagtggaaaacggagaagagtcgcgtgcctcttcgagggcatcc
tcgcgagcgtccagcagaaaatcgcgatcccactcacgatctcgttccaaatccggttcg
agatcaagatcgagatcgaaatcaagatcgagatcgaaatcaagatcgagatcaagatcg
cgttcacgatcgcattcacgttcacgttctcgttcacgttcacgttcacgttcacgttca
cgttcacgttccccgtcgaaatctagatcaccgtctcgatcgcgctcgcgttctcagtcg
cgttcgccgtctaaatcgcgcagtaaatcacgatctcgatccggcagtcctcagtcgagg
aacacatcgagatctagatccaagtcaaaatcgcgctcgaggacacctgcgaagtcaccg
tcaagatctcggtcgagctcgcgatctaagtccaggtcgcggtcaagatcgagatctgga
actggtagcggcagcggttccgaaagcgcgagcggcgaaagcggctccgagagtgagtga
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