KEGG   Solenopsis invicta (red fire ant): 105202260
Entry
105202260         CDS       T03916                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
soc  Solenopsis invicta (red fire ant)
Pathway
soc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:soc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105202260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:soc03400]
    105202260
Enzymes [BR:soc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105202260
DNA repair and recombination proteins [BR:soc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105202260
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase BRCT TMEM240 2H-phosphodiest
Other DBs
NCBI-GeneID: 105202260
NCBI-ProteinID: XP_011168982
LinkDB
Position
13:2437974..2534835
AA seq 1010 aa
MSSDEDQQQQQEEEEKPFVVERAKTGRAKCKRCKCPLEKDEIRIGKYVASFFSDGKLMPA
WHHVTCMFEAFAKQRASTKRIDDPAEDVKGWEQLSDDDKKIILDKLEAFEKSSPGKASKK
APTSRKAAPSSGNSSGKTPKKAPEQKKIVADVKEKNKGKDKEGQSKVPSKDDSFREFRRV
CSNVADVDAYTDKTAVIKKMFTKGSLGDGFKSDIVLWCKLLLPGAVKRIYNLQSKQLIKL
FARLLVQDEDEMLEHLEQGDVAETISVFFESSVAVSPCAASVLTIQDVDLFLENLSRLTK
EEEQIQHFRSILNKCTANDLKMIIRLIKHDLRINSGPKHILEAVHPDAYKAFQMSRDLET
VVRRFLPDQEKPCTSGLPLSRNKVALSLMTPVLPMLAEACTSVEMAMRKCPNGMLSEVKY
DGERVQVHKNENEFRYFSRSLKPVLPHKVNLFKDYIGRAFPDGDDLILDSEILMVDNETG
QPLPFGTLGIHKKEEFKNANVCLFVFDCLYYNGEILINKSMLERRNILKDRMTEIPNRIM
LSEVHEVHEPRELAERIIHVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMADS
ADLVVLGAWYGTGNKGGMLSVFLMGCYDQKRDKWLTVTKVHTGHDDATLAVLQDQLDMVK
IGKDPEKLPSWLHAKKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTAEGISIRFPRVTR
IRDDKDWSTATNLDELRTLFRRKPESVNFDHLLGTLGDAEDVPRKKLSDSASTSPRKTKI
ARINSWDEPSTSYKVKEEPMDIKKEVKGSLPTEGRKKRKEDESDETSPDKIRSEKKRSKV
KREIKRETEAPSSTRFKKEGRADSGSERQGEDRLAGGTERSFESSFDANTSDSDIEDAKF
NNVLQDVRASLAPGFDSSRRKNVRRLLKTLGATIVTPVNGHDSTATHVIHTRTEIPSSAV
LGDYAEYPRTVRHVNVSWLEETATRSRRQDEIWHAVQLAGDYCNCPCTHR
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgtcgagtgacgaggatcagcagcagcagcaggaggaggaggagaaaccattcgtcgtg
gagcgcgcgaaaaccggccgcgcgaaatgcaagaggtgcaaatgtccgctcgaaaaggac
gagatacggatcgggaagtacgtggcgagcttcttctcggacggcaagttgatgccggcc
tggcaccacgtcacttgcatgtttgaagcgttcgcgaaacaacgcgccagcaccaagagg
atcgacgatcccgcggaggacgtgaagggttgggagcaattgtccgacgacgacaaaaag
atcattctggacaagctggaggcattcgagaaatcttcgccgggcaaagcttcgaagaag
gctccaacgtcacgtaaagcggctccctcttctggtaattcctcggggaaaacacccaag
aaggctccggagcagaaaaagattgtggcggatgttaaagaaaaaaataaggggaaagat
aaagaggggcaaagcaaagtcccatcgaaggatgattcctttcgcgaattccgacgcgtg
tgcagcaacgtcgccgacgtcgacgcctacaccgacaagactgcggttattaagaagatg
ttcacgaagggatcgctgggagacggttttaagagtgacatcgtgctctggtgtaaactg
ttgctgcccggcgccgtgaagagaatttacaacttgcagagcaaacagctgataaagttg
ttcgcgcgattattggtccaggatgaggacgagatgctggaacatctggagcagggcgac
gtggcagagacgatcagcgtgttctttgaaagtagcgttgccgtgtcgccttgcgccgcg
agcgtattaacgatccaagacgtcgatctctttttggaaaacttgtcgcgtctgaccaaa
gaggaggaacagatccagcattttcgatcaatcctaaataaatgcaccgccaacgatctg
aagatgatcatacgtctgatcaaacacgatctaaggattaactctggaccgaaacacatt
ctcgaggcggtccacccggacgcgtacaaggccttccagatgtcccgagatctggaaacg
gtggtgcgacgtttcctgccggatcaggaaaagccttgcacctcgggcttacctttaagt
cggaataaagtggccctttcgctgatgacacccgttttaccaatgctggcagaagcatgc
acctccgtggaaatggcgatgcggaagtgtccaaatgggatgttgtcggaagtcaagtac
gacggcgagcgcgtgcaagtgcacaaaaacgaaaacgagttccgatactttagcagatcc
ctcaagccggttttgccgcacaaggtgaatttatttaaggattacatagggcgagcgttt
cccgatggtgacgatttaattctcgattctgagattctcatggtcgacaatgagaccggg
caacctttgccgttcggcactttaggaattcacaaaaaagaagaattcaaaaacgccaat
gtgtgccttttcgtcttcgattgtttatattacaacggcgagatactgataaacaaatct
atgctggagcgcaggaacatcttgaaggataggatgaccgagataccgaatagaataatg
ttgtcggaagttcacgaagtgcatgagccgcgggaattagcggaaaggattatccacgtg
ttgaaattgggtctcgagggtttggttctgaaagacatcgatagcaaatacgagccgggc
aagaggcactggttgaaggtaaaaaaggactatctgtgcggcggtgcgatggctgatagc
gcagatctcgttgtgcttggtgcatggtacggcacgggcaacaaaggcggcatgttgtca
gtcttcctaatgggctgctacgaccagaagcgcgacaagtggttaaccgttaccaaagta
cacacggggcatgacgatgccactctggcggtgcttcaggatcaactcgacatggtgaag
atcggcaaagacccggagaagctaccgagctggttgcacgccaagaaacccatggtgccg
gattttgtggcgagggatcccaagaagcagccggtgtgggagataacgggcgccgagttc
acgaaccaaggggtgcacaccgcggagggtatcagcatccggtttccgcgcgtcacacgg
atccgcgacgacaaggactggtcgacggccaccaacctggatgagctgcgcactctcttc
cgaaggaagcccgagtccgtcaattttgatcacctactcggcacgttgggggatgccgag
gacgtcccgaggaagaagctgtccgattctgcaagcacgtcgccaaggaagaccaaaata
gcaagaatcaactcgtgggacgagccatcgacgagttacaaggtgaaggaggagccgatg
gacatcaagaaagaagtcaaagggtcgcttccaacagaaggccgaaagaaacgaaaggag
gatgaaagcgacgaaacctcgcccgacaaaatccgatcggagaaaaagagatcgaaggta
aagcgcgaaattaagagggaaacggaggctccttcgtcgacaagattcaagaaggaggga
agagcggattcgggaagcgaacggcaaggggaagatcgtctcgctggcgggacggagaga
tctttcgagtcctcgttcgacgcgaatacctccgattcggatattgaggatgccaaattc
aacaacgtgctgcaagatgtgcgagcgagtctcgcacctggtttcgattcgagcagaaga
aagaacgtacgacgattgcttaaaacactcggcgccacgatagtaacgccggtgaacgga
cacgactcgacggcgacccacgtcatccacacgcgcacggaaattccgtcctcggccgtc
ctcggggactatgcggaatatccgcggaccgtcaggcacgtgaatgtgtcctggctggag
gaaacggcgacgcgatcgaggcggcaggacgaaatctggcatgcggtccagctggctggc
gattactgcaactgcccatgcacgcatcgataa

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