Solenopsis invicta (red fire ant): 105202266
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Entry
105202266 CDS
T03916
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soc03021
]
105202266
Transcription machinery [BR:
soc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
105202266
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
105202266
NCBI-ProteinID:
XP_011168998
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All DBs
Position
13:2550981..2562120
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AA seq
2002 aa
AA seq
DB search
MDATNGQKPLVGQPTTGGGSTSDKGKEWQMELLMEKLRSKASTFKPLVETAKNMRMAMLD
KRFAIDSIEKNQLQKCLDTLQHSIKVTSFQSMVERLESLARQLGLKFMMSGPPGTEIFIS
SDMFFLEVLLEPSGLVRDVKIHHEGKSEQQSCEALASALSRGDFVDFTTQLEGLASIYQL
NADKKVKCKAFSALQSLEADLGVLAQLQTFMKEPFNLVHKSPVGILERRKGGHPMKLTYF
VSPYDLIDEENRTYDTLNPDTIIKRKIGHSVTVCMEGSTGHKLPTSSIITVNRSPTGKST
PSYAPLTSTNSSMLPACFVLKLGKKMPICMELVKRIQKVTELECGDISAPHPMLSLIIQH
ASDGQLDCRNNRGLYVTLPDQQHCYFMTENKNMEGVLVCSIPFTHPAHVPQILVYLRQQA
LFNCLIASCVRPMARQDPEHTTILEISALSWQHISVSVEHPYEETMATAELDLTDISTLK
CRLYGVSMTTNAEQISDLSGRVLQRCLSIPLTIRVLLKVWEGRPLPAVMNNLTSGSGSSN
GSYSLNLGSGGKDQTGQNASGAAPGMPDFTNGETKVKQEPGLNNGSNGCMGGRQTQQQQS
SSNQLQQQQQQQPFLDAGTENSIGFPSYSGQSDTTTMTMSISGTNNASASMLNPLQLGAL
LGQAKNSMTGNSNTNERGKKTRKRKTGTDGLWRSPKRKSDGGDSITTEILLESSSSENST
PLGTPTGGRENLTSETRTSTPTSATSLTSGMDFSNLDTTDILDKSASDYDLDNSERDSEI
MEVQHSGAEQQQQQQQQQQQQQPQQDVEELIKRESSSSRKSKKSRSGGGSEEKKSSPTRI
FVDETSTTNNGNKSLPVPPSVSITPIGNLDQANTTNYNSVLTGMGLERRPGIEIIPIASS
PSQTNLPSSITITPIAGPAPSQKTSGLTSATEDRQRSERKSGGGKSSGSSSKSSSEDNKS
GGNKLEKRRKRKREDSPMGPPDKVPSSGKQQQDPLSKPVSVSIKPSTEQSPPSGSNAGVG
LSCSSTRPTSPAAVRKFSPSPTHSSSLATLVGKSSPTLKAGQSAAITCGKPVQSPKHSPV
YSSSPKHNTPNVSVVPMSVPMSLSVSTVPNTVGNVPSVAVSVPVPVPASASPKHGNTSSP
KHGSSAASSGKPSMSALKSAANSPSSKSSGSSSSDTIATPSKVKSSSSSSSSKESSGRGD
KERRTSSISSSGGSGGGHQSPKTKSSSGKLKQLEMIPSGGGEAQVSSLQASGGSTPPSGQ
IDAASKSAIAAQQARNRKSSLNAVIDKLKINAQHCTETDACGNGGGTVKGSGSSGLGGGS
TGGMSSAQKDKSLGGSGSSSSSGGKIVEGGKSSCVTKNASVDAKNPAEYMVKHSSDQGIK
ITINKTRTKDSKQSAASLKLSSGGMTAASSSSSSLSSVASSSSSSSSNVTTGSNGSPKTH
TGLKPGVNSGPASKKPQTLQSAQKLLPAKMMLAAAGIKSAISSGTTNTGGGASITASATG
GIGGNLSKSSSTSKSSGSPKTSSGATDLSRGRDKPRIPKSGDKGIFASKGLGDARKSSPS
ALREESESERAFKLLAAHASISSLPPSLPPQLVMEGLMKQLDTKFQIPKLSARANVADAD
KNKSSDKLSILSDSGKQTLDGLKQEQSKIAGLSNVTVSVSKSSLSDDQSRRDHSQNKPDN
LSIATSATGSMSLNLVGENAGLMLPPQSAADSDVPTNLCIQPMVDNEPSRDSCKDLGLRQ
TSTGQQFLGKIDDTSAGGILSKGNVPDQLTSSGAKSYASMTSSSTSTASTGVSESLNLST
KPADQAALQTKYNKITEEKKQQQQTSSSSSSTSSSSSSSSSIFSSLGNVVTTSDSNPNVM
TSDSVGGGGGNGGSGGEQEVAAAAAAAAAEMLLDFSATNKDPMTKGSHGLPASLTQHHLT
TIPERAMTQAAPTVRRNTPPPPPPPPPLPAPFPPAASPSVSVHIVKSPAPSPRVIPPSPH
SSASPCITDDELMDEALVGMGK
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaccaacgggcagaagcccctcgtggggcaacctacgacaggaggaggatct
acctccgacaagggtaaggagtggcaaatggagttactgatggaaaaattgcgctccaag
gcttccacgtttaaacctttggtggagactgccaaaaacatgcgcatggccatgttggac
aagcgttttgcgattgacagcatagagaagaatcaattgcagaaatgtttggatactctg
cagcattctatcaaggtcacttccttccaatccatggtagagcgtttagaaagcttagca
aggcagttaggattaaagttcatgatgtctggtcctccaggcacggaaatatttatatcc
tccgacatgttcttcttagaagtcctattagaaccttcagggcttgtcagagatgtaaaa
atccatcatgagggaaaaagtgaacaacagagttgcgaagcactcgcatcggcgctgtcg
cgcggtgactttgttgatttcaccactcagctggaaggactggcgtcgatatatcaactg
aatgccgataagaaagtgaagtgcaaggcattcagcgccctgcaatccctcgaggctgac
ctgggtgttctggcgcagctgcaaacatttatgaaagagccgttcaatctggttcacaag
agccctgttggaattttggaaagaagaaaaggtggtcacccgatgaaattgacgtacttc
gtctcgccatacgatttaatcgacgaagagaatcgaacctatgacactttgaatcctgat
acgatcattaaaagaaaaatcgggcactcagtgactgtttgtatggaaggttcgacgggc
cacaagctgcctacttccagtattataactgtaaaccgaagtcctacaggcaagagcact
ccttcgtacgctccactgaccagtacaaattcctccatgttgcccgcttgctttgtttta
aaacttggcaagaagatgcccatctgtatggagctggtgaagaggatacagaaagtcacg
gagcttgagtgtggcgacatctccgcgccacatccgatgctcagtctgataatacaacac
gcgagcgacggtcagctggattgccgaaacaacagaggtttatatgtgaccttaccggat
caacagcactgttacttcatgacggaaaacaagaatatggagggcgtgcttgtatgcagt
atcccgttcacacaccccgcgcacgtgccgcagatcctggtatatctgcgacagcaggcg
ttattcaattgcctgatcgcgagctgcgtgcggccgatggcacgtcaggatccggaacat
actaccatacttgagataagtgccctttcgtggcagcacattagcgtgagtgtggaacat
ccatatgaagagacgatggccaccgcggaactagatctaacggacatatcgacgctcaag
tgccggttgtacggcgtgagtatgactacgaacgcggaacagatatcggatctcagtggt
agggtattgcaacgttgcctcagcattccattgaccatacgagtattgctgaaggtctgg
gaaggtcggcctttgcctgcggtgatgaacaacttgaccagcggcagcggcagcagcaac
ggtagctacagtcttaatctgggatccggtggtaaggatcagaccgggcaaaacgcgtct
ggtgccgcacctggcatgccagacttcacgaacggtgagacaaaggtgaagcaagaaccc
ggtttgaacaacggcagtaatggatgtatgggaggcagacaaacacagcaacaacaatct
tcgtcgaatcaattgcagcaacaacagcaacagcagccttttttagatgccggaacggaa
aatagtatcggttttccgtcgtattccggccaatccgatacgacgacaatgacgatgagc
atctctgggacgaacaacgcctctgcctctatgctgaacccattgcagcttggtgcactg
ctgggacaagcaaaaaactccatgacgggtaattcaaacacgaatgaacgtggcaaaaag
acgcggaaaaggaagacaggcacagacggtctttggcgtagtccaaaacgaaagagcgac
ggtggagatagcatcacgacagagattctgttggagagctcgagttcggagaactcgaca
ccgctgggaacgcccacaggcggtcgagaaaatctcacatcggagactagaacatctaca
ccgacttcagctactagtttgacgagcggtatggatttttcgaacttggatactaccgac
atactcgataagagtgcctcggattatgatctcgacaattccgagagagacagtgagatc
atggaagtgcaacatagtggcgctgaacagcaacagcaacagcagcagcagcagcaacag
cagcagccacagcaagacgtggaggaattgataaaacgtgaatcttcatcgtcacgcaag
tcgaagaagagtcgaagtggcggtggtagcgaagaaaagaagtcaagcccaacaagaata
ttcgtcgacgagacttcgacgacgaacaatggcaacaaaagtctaccggtgccaccatca
gtgagtatcaccccgatcggtaatctggatcaagcaaacaccaccaactataactccgtg
ctcacgggcatgggtttggaaaggagacctggtatcgagattataccgatcgcctcatcg
ccatcgcagactaatttgccaagttcaattaccatcacgccgattgctggtccggcacca
tcacagaagactagcggtctgacaagtgcaacggaagatcgccagcgaagtgaacggaag
agcggcggcggaaagagcagtggcagcagtagcaaaagcagctccgaagataacaagagc
ggtggaaacaagttggagaaacggcgcaaacgtaaacgggaagacagcccaatgggtcca
ccggacaaggttccgtcgagtggcaagcagcagcaagacccactctcgaaaccggtatcg
gtgagcattaaacccagcaccgagcaatcaccgccgagcggtagtaatgctggcgtcggt
ctgagctgctcgtccacgcggcccacttcacccgcggccgtacggaagttcagtccgtcg
cctacgcattcgagttcgctcgccacgctcgtaggcaagtccagtcctaccttgaaggct
ggtcagtcagcagcgataacctgcggcaagccagtgcaaagtccgaagcactcgcccgtc
tatagcagcagtccgaagcacaacacgccaaacgtgtcggtggttcctatgtcagtcccg
atgtcgctatccgtgtccacggtgcccaacacagtaggcaatgtgccttccgtagcagtg
tccgtaccggtcccggtacctgctagtgcaagcccaaaacatggcaacacttcgtctcca
aaacatggtagctcggctgcaagcagcggtaaacccagtatgtccgctctgaaatcagcg
gcgaactcgccgtctagtaagagcagcggcagtagctcttccgacacgatagcgactcca
tccaaagtaaagtcctcctcttcgtcgtcctccagtaaggaatcctccggtcgcggagac
aaggagagacgaacctcatccattagctcatccggcggttcgggcggcggccatcagagt
cccaagactaagtcctccagtggtaagctaaagcagttggaaatgatcccttccggcggc
ggtgaagcccaggtctcctctctgcaggcctctggcggaagcactccaccatccggacag
attgatgcagcgagcaaatctgcgattgccgcccagcaggctcgaaatcgcaaaagttct
cttaacgccgtgatcgataaactaaaaataaacgcgcagcactgtactgaaaccgatgcc
tgcgggaacggtggcggtacagtgaaaggtagcggatcctctggtcttggaggtggcagc
actggtggaatgagcagcgctcagaaggataaaagcctcggcggcagtggttcgtcgtca
tcgagtggagggaaaatcgtcgagggaggaaagtcttcttgcgttaccaagaatgcatcc
gtggatgcaaagaatcccgctgaatacatggtgaagcacagctcagatcaagggatcaag
atcaccatcaacaagactcgcaccaaggattccaagcagtcggccgccagtctgaagctg
tcgtcgggagggatgacagccgcgagttcatcttcgagctccttgtcgtccgtagcttct
tcgtcatcgtcatcgtccagcaacgttaccaccggcagcaatggctcgccgaagacgcat
acgggtctcaaacctggcgtaaactccggaccggcttcgaagaaaccgcaaacgttacag
tctgcccagaaattgctgcccgcaaagatgatgctggccgccgccggtataaagtccgcc
atatcctcaggcacgacgaataccggcggtggtgcgagtatcacggcgagcgcaacgggt
ggtatcgggggaaatctatcgaagagtagctcaacttccaaatcttccggttcaccgaag
acgagctccggagcaactgatctaagtcgcggccgagacaaacctcgaatccccaagtcc
ggcgacaagggaatattcgcgtcgaagggcctcggcgatgccaggaagtcgagcccgtct
gctttgcgggaagaaagcgagagcgagcgcgcgtttaagctgttggccgcgcacgcgtct
atctccagtcttccgccgagcctgccgcctcaactggtgatggagggcctgatgaagcaa
ttagacactaagtttcagataccgaagctgtctgctcgcgcaaacgtcgcggatgctgat
aaaaataagtcgtcggataagctctccatactgtctgattctggtaagcagaccctcgac
ggtctgaaacaggaacagagcaagatcgccggtttgtccaacgtcaccgtgtcggtatcc
aaatcgtcgctatcagacgatcaatcgagacgagaccattcgcagaataaaccagacaat
ctgtcgatcgctacgtccgcaactggctcgatgtctttgaatctcgtcggggagaacgct
ggtttgatgcttcctccgcaatcggctgccgattcggatgtacctacgaacctgtgcatt
caaccgatggtggacaacgagccctcccgcgattcctgcaaggatttaggtttgagacaa
acgtcgaccggtcagcagtttctcggcaagatcgacgatacaagcgctggtggaattctc
tccaagggcaatgttcctgatcagttgacgtcgtcaggcgccaagtcctacgcatcgatg
acaagctccagcacttcgaccgcgtcgacaggcgtctccgagagcctgaatctgagtacc
aagcctgccgatcaggcagctctgcaaaccaaatacaataagatcaccgaggagaagaag
cagcagcagcagacgtcatcatcgtcttcctccacatcatcgtcatcctcatcatcgtct
tcgattttttcgtcgctgggtaatgtcgtgactacgtcggatagtaacccgaacgtcatg
acgtccgatagtgtcggtggcggtggtggcaatggcggtagtggtggagaacaggaggta
gcggcagctgcagctgcggcagcagcggagatgctgctggatttttccgcgacgaacaag
gacccgatgacgaaggggagccacggcctgccagcatccttgacgcagcatcatttgaca
acgattccggagcgggcaatgacccaggcggcgccgacggtgcgtcgcaacacaccgcca
ccaccgccgcccccgccgccgcttccggccccgtttccgcccgctgccagtccgtccgtc
agtgtacacatcgtcaagagcccggcaccgagcccccgagtgattccaccttctccccat
tcgtccgcgtcgccctgcatcaccgacgacgaactcatggatgaggccctggtcggtatg
ggtaaatga
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