Solenopsis invicta (red fire ant): 105204681
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Entry
105204681 CDS
T03916
Name
(RefSeq) ataxin-2 homolog isoform X2
KO
K23625
ataxin 2/2L
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
105204681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105204681
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105204681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
DUF2642
Motif
Other DBs
NCBI-GeneID:
105204681
NCBI-ProteinID:
XP_011172166
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All DBs
Position
3:32855876..32863229
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AA seq
921 aa
AA seq
DB search
MNSKRKNRTNNNRYQSLGFPRQDHNSRSPRARGPQERCVAAEGVYNNAHFMHAVTSHVGN
TVQIQTKSGSVFEGVFRTFSSQFDVVLEMAHRVESSGQISVDSVVEKLIFKPTDVVTISA
KDVDLDYAIRDTFQTDTAISKFNGIIGEKELEPWDPPTTMNGADLELDGAANGWDVHEMF
RKNEQDYGVQTTFEPSLVGYTLQLQRKDTKDYKEQEQKAAEIANEIESQPNHKARLELEN
GDEEERFAAVTRPTEGKYIPPPLKKKNGNTGKLMRTSGGGGGGGGGSGGGGGGGGGGVGG
GGEPPSSPGTTNNKNVYSQPPPSTVTVNVPQPSMPVGVQPAHTPSVQHPVSLNMNIPPNG
VVVTYNNPPPPFVPPPTTQSQQVIQQNQSQSQVNPSISQISFPSSQQTPPNKINAEKRER
PGRQQVYQADKAPPAPFSQSNVASSHQQQQSSHQQHTSLTQQNSVEGQIVIHKSDHRKVP
TPRGREEQHSELRQFATEFKLAESQGLPPDTPQISRKQQHQHQQDIHSATPMNQPHHQGP
HQHTSPQQQSQQQPSTQQHTSPHQQHQTVQEEPVINKPPPGPPVRSTSPPQQQQQPPPQQ
QQQQQPLSQQQQSQAQQQQQQQPPLPSQQQQQQQQQQPPPSQPAQTNTPTVQQSPPEPAV
DKITTAFKKSTLNPNAKEFNPNAKPFTPRSPSTPTPSRPHTPQTPQYTGATMPATVVMPA
YVTPTFSQPPAQQVARFRKGQYSLALPMVQHRAPDIASQMQVAAATGQPLLAPAIHPFQV
PYPGQPAYQQMVRMVQAPPPPHMATPYHHHHDSQGPQAPGIQYMGPHAHPHPHVAQQPPS
QTPSPANPNQPHTPGAYNPPGTPQPTYPQPPPQGHAPSYPIMCPIIPSHIPSIPPQHMQY
LPPQPPPGAQQTIPVILPHSQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaagaggaagaatcgtacgaacaataacaggtaccaatcacttggctttcct
cgtcaagatcataatagcagatccccgcgagcacgtgggccacaagagagatgcgtcgca
gccgagggggtttataacaatgctcattttatgcatgcagtcactagccacgttggcaac
acggtacagattcaaactaaaagtggttcggtattcgagggtgtatttagaacattttcg
agtcaattcgacgtagtgttggaaatggctcatcgtgtggagagttcgggacagattagc
gtagatagcgtagtagagaaattaatttttaaaccaactgacgttgtcactatatctgcc
aaggatgttgatttagattatgctataagagacactttccaaactgatacagccattagt
aagtttaatggtataatcggcgagaaggaactcgagccctgggatccgccgaccactatg
aacggggctgatttagaattggatggtgctgccaacggttgggacgtgcacgaaatgttt
cgcaaaaatgaacaagattatggagttcaaacaacgttcgaaccttccttggtcggttac
actctacaactgcaacgtaaggacacgaaggattacaaggaacaagagcaaaaggctgct
gaaatagcaaatgagatcgaatctcaaccgaatcacaaagctagattagaactagaaaac
ggcgacgaggaggaacgattcgcagctgtgactagacccaccgaaggaaagtatattcca
ccaccgttaaaaaagaaaaatggcaacactggcaaactaatgagaaccagcggcggtggt
ggtggcggcggcggcggcagcggtggtggcgggggcggtggcggtggcggcgttggcggc
ggcggggagcctccgtcttcgccaggaaccacgaacaataagaatgtctacagtcaaccc
cctccgtccacggtcacggtcaatgtcccacagccaagcatgccggttggagtacagccc
gctcatactccctcggtgcagcatccggtatctttaaatatgaatataccgcccaatgga
gtggttgtcacgtataataatccaccaccgccattcgtgcctccaccgacgacgcagtcg
cagcaagtaatacagcagaatcaatcgcaatctcaagttaatccttcgatatcgcaaata
agcttcccttcgtcacaacagacacctccgaataaaataaatgcagaaaaacgtgagcga
cctggcagacaacaagtttatcaagctgacaaagcgccaccagcaccattttcgcaatca
aacgttgcgtcctctcatcaacagcaacaatcttcgcaccagcaacatacatcattgaca
caacagaattctgtagaaggacaaatagtcatacataaatcggaccacagaaaggttccg
acaccacgtggaagagaagaacagcattcggaactgagacaattcgctacggaatttaaa
ttggcggaatcgcagggactgccgccagatactcctcaaatatctagaaaacagcagcat
caacatcaacaagacatacattccgctactccgatgaatcagccgcatcatcaaggtcct
catcaacatacgagtccacaacagcaatcgcagcaacaaccgtctacacagcaacatacc
agtcctcatcagcaacatcaaactgtacaagaggaaccagttattaataagccaccgcct
ggtccaccagtaagatctacaagtccgccacagcaacaacaacagccaccgccacaacaa
caacaacaacagcagccgctgtcgcaacagcagcaatcgcaagcgcaacaacaacaacaa
caacagccaccactaccatcacaacaacaacaacaacagcagcagcagcaaccaccgccg
tcacaaccagctcaaactaatactccgacagtgcaacaatctccaccggaacctgcggtc
gataagataactactgcttttaaaaaatctactttaaatcccaacgctaaagaatttaat
ccaaatgccaaaccatttacgccgcgttcacctagcacaccgacgcctagtcgaccgcat
acgccacaaactcctcagtatacaggtgcgactatgcccgcgaccgttgttatgccggca
tacgtaacgccaacatttagtcaaccacccgctcaacaagtggcaaggttccggaagggt
cagtattccttagcactgccaatggtgcagcatcgtgcgccagatatagcgtctcagatg
caagtagccgcggcaacggggcaaccgttactagcgccagctatacacccattccaggtg
ccttatccaggacagccggcgtatcagcaaatggtacgaatggttcaggcaccgccacca
ccacacatggccactccgtatcatcatcatcacgactcgcaaggaccgcaagcccctggt
atacaatatatgggcccgcacgctcatccacatcctcacgtagctcaacagccacctagc
caaacgccgtcgccggctaatccaaatcaaccgcacaccccgggggcttataatccaccc
ggtactccacagcccacgtatccgcaacctccgccgcagggtcacgcgccgagttatccg
atcatgtgccctataattccatctcatataccttcgattccaccgcaacatatgcaatac
ctgccaccacagccgcctccgggagcgcagcagactatacccgtcattttaccgcacagt
cagtag
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