Solenopsis invicta (red fire ant): 105208009
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Entry
105208009 CDS
T03916
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soc01009
]
105208009
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105208009
Protein phosphatases and associated proteins [BR:
soc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105208009
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105208009
mRNA cycle factors
Stress granule specific factors
105208009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DUF2795
Motif
Other DBs
NCBI-GeneID:
105208009
NCBI-ProteinID:
XP_011176029
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All DBs
Position
8:7511378..7520811
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AA seq
804 aa
AA seq
DB search
MLRHQHHAMQNQLRDNRMAGPMRPMQQASMPQLHQPQHLLPHRNPHQQILSMPPHQQHMH
HMQHPGSPHGNPRQPMLMGMNTHNTNNTMVSVSMKDQANTVSVTLQNVQQPQYPHQQQPQ
QQQQPNNQQNQPPQQQQSQQQVQQSQSQQQQQQHVPQQANVDQSKAVTNDANGESRDDNA
SGQNHANGTNPALANMKEKTPMCLLNELARFNRIQHQYRLTNEQGPAHKKRFTVTLKLGE
EEYVAEGPSIKKAQHSAATEALTKTWYRQPPPKPTKAMRIGHLGKCPTGSGHLPPTVELN
ALAMKRGEPTVYTFRQAPPATLQHQFMPHGFGNFPRMYTPRLTYNRGVHTDLQGLYLVTL
KVGEREFTGRGLTGQAARHDAASRALEQLRQLPLPEEIANVNNTNENGTLGGIDDPNAEL
KSPVSLVHETALKRGLPVSFEVVSESGKPHIRTFMTKCTVGEKVTVGEGSSKKVSKKRAA
ELMLDELKRLPPLPATIQNRTMRVKRKPPATKKKSRNLIKVYQEPRAENEAAEEVNPVSR
LVQIQQAKREREPVYNLIDEKGAPRRREFVMEVTMGQHSAQGIGPNKKLAKRAAAEALLA
QLGYSKPSPQPAKPSIKTGESENTESKPRKVTFLEDEQMNDTQPHSVGGTIGRQLVPGLL
LVDGGQESKLGNGPSVQIVAEELREQQQQNTAGVSPKDQLHYLSQLFNFSVEFSDFPKGV
SINKEYLSLVSLSTDPPQVCHGNGATITASRNQAALRALRTLSKLGLDNASNATQVKKDK
GASGDGIHISIQVKNNIMDGAIDK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgttacgccatcaacatcacgcaatgcaaaatcagcttcgagataatagaatggcagga
ccaatgcggcctatgcagcaggctagcatgccccagctacatcagccgcagcatttgtta
ccgcataggaatccgcatcaacaaatactgtcaatgcccccccatcaacagcatatgcat
cacatgcagcatcctggctcgccgcatggaaatccaagacaaccaatgttgatgggcatg
aatacgcacaatacaaacaataccatggttagcgttagcatgaaggaccaagcaaataca
gtttctgtaactcttcaaaacgtgcaacagcctcagtatccacatcagcagcaaccacaa
cagcagcaacaaccgaataatcagcagaatcaacctccccaacagcaacagtcgcagcag
caggtgcagcaatcacaatcgcagcaacagcagcagcaacatgtgccgcagcaagcaaat
gtggatcaatcaaaggcagtaacgaatgatgccaatggagagtccagagatgacaatgcg
tctggtcaaaatcatgccaacggaactaatccagctttggcaaacatgaaagaaaaaaca
cccatgtgcttattaaacgagttggcgagattcaataggattcaacatcaatacagactg
accaacgagcagggaccggcgcacaaaaagagattcacggtgacactgaaacttggcgaa
gaagaatacgttgctgaaggtcctagtataaaaaaggctcaacacagcgcggcgaccgaa
gcattgacgaaaacttggtaccgtcaacctccacctaaacccactaaagccatgaggatc
ggtcatctgggcaaatgtccgacaggttctggacatttaccgcccactgtcgaactaaac
gccttagcgatgaaacggggtgagccaactgtttatacgttccgacaagcacctccagct
acgttgcagcaccagtttatgccgcacggattcggtaatttcccacgaatgtatactccg
cggctcacatacaatcgtggagttcacacagaccttcaaggattatatcttgtcactttg
aaagtgggcgaacgcgaattcacgggtagaggtttaacaggccaagcagctcgtcacgat
gccgccagcagagccttagaacaattacgccagttgccgttaccagaagagatcgcaaac
gtcaataataccaatgagaatggcacgctgggtggcattgacgatccgaatgctgaattg
aaaagtcctgtatctcttgttcacgagactgctctgaaacgtggactgccagtcagtttt
gaagtcgtatccgaaagcggtaaacctcacataagaaccttcatgacaaaatgcaccgtt
ggcgagaaagttactgtgggagaaggatcctcgaaaaaagtatcgaagaaacgcgccgcc
gaattaatgttggacgaactaaagcgtcttcctccgttaccggctactattcagaatcga
acgatgcgagtgaaacgtaaaccgccagcgacgaagaagaaatctcgtaacttgatcaaa
gtttatcaagagccccgcgcggagaatgaagccgcggaggaggtcaatccggtctcccgg
ttggttcaaattcaacaggcgaagcgagagagagaaccggtttacaatctgattgatgag
aagggcgctcccagacgcagagaatttgtcatggaagtaacaatgggtcagcactccgcc
cagggaatcggacctaacaagaaattggctaagagagctgcggctgaagctctcttggcg
caattgggatatagtaaaccgtcaccgcaacccgcgaaaccgtctataaagacgggagaa
agcgaaaacacagaatcgaagcctagaaaagttacatttctcgaggatgaacaaatgaat
gacactcaacctcactcggtaggaggtaccataggccgccaattagtacctggtctttta
ttggtggacggaggtcaagaatctaaactggggaatggacccagcgtacaaatagtcgct
gaagaattgcgcgaacagcaacagcagaatacagctggtgtttcgcccaaggatcaattg
cattatttatctcaattatttaatttcagcgtagaatttagcgattttcccaagggagtg
tctataaacaaggaatatttatcacttgtgtcgctaagcactgatccaccacaagtttgt
cacggtaatggagcgacaataaccgcgagtcgcaatcaagcggctctaagggcgcttcgt
actcttagtaaattgggacttgataatgcctcgaatgcaacacaagtgaagaaggacaaa
ggtgcgtctggtgatggaatacacattagcattcaagttaaaaataacataatggatgga
gctatcgataagtaa
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