Solenopsis invicta (red fire ant): 105208111 Help Entry 105208111         CDS       T03916                                  Name (RefSeq) collagen alpha-1(I) chain   KO K19719   collagen type II alpha Organism soc  Solenopsis invicta (red fire ant) Pathway soc04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:soc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105208111  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:soc00536]     105208111 Glycosaminoglycan binding proteins [BR:soc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105208111 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  105208111 NCBI-ProteinID:  XP_011176175 LinkDB All DBs Position 1:30698073..30710551 Genome browser AA seq 1494 aa AA seqDB search MKRQALELITGLLVVQLLLPLPNQVNAVKKRLRKQRSKPQELQGQQPGTDYDYEFYDNYD EYEEKNETTTLPPSRFSGWPEAPETFLRRGTPTDLPAPTTTQFSDHKETSSTSDQDHSVS PTEILPGESIYSSVAIPGPRGDPGRPGDAGRPGDVGFPGQPGIPGTPGSPGLPGPVPDVS LYYQQLALSQANEDKGPSGAAASLYGPEAYFQMQVGPMGPRGPPGAPGAPGPQGFQGARG ESGEMGPPGPPGTSGPRGLPGLPGKDGINGEDGETGSPGSPGSPGPRGLPGIPGLPGLKG HHGFPGLDGAKGEQGVSGEKGSTGSPGPMGPVGSMGPAGPRGERGREGPPGPPGLRGLDG IAGSPGQPGAVGKSGSPGFPGNPGVKGDQGPEGPPGSQGLQGPRGESGRPGQPGETGPQG PQGKDGTPGEKGATGSVGLVGVPGFPGARGQPGTPGNPGISGAKGAPGLPGDRGFKGDAG VKGDPGMPGPRGLPGPPGNEGKRGKRGMRGPIGAAGPLGERGAPGVRGLPGSDGPVGSKG QSGDRGPAGVVGPKGATGDPGRPGPSGLQGARGLMGRPGASGKPGNPGERGIQGADGKPG EQGPPGPQGLPGPLGLPGERGYPGERGKDGEPGNPGSPGPRGDIGKEGPPGVQGPPGPPG SDGARGLPGVVGPRGFQGLPGAAGNPGVPGKDGEAGVQGPSGPPGLVGNRGERGFPGERG LMGPPGPMGSRGETGTQGADGLIGLPGLKGDKGSFGSPGLLGLPGVRGLPGEPGHKGERG TSGPIGPEGPPGHIGERGPQGEVGPPGPPGEPAERGDPGPPGPVGEPGAHGNPGERGPHG LQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNSGLPGSRGEIGLPGPIGLTGAKGIRG EPGARGEPGLMGPPGIVGHVGPSGPPGNMGSPGAPGLPGVKGDAGDTGRPGNPGPIGNPG LPGIDGIKGESGSPGPQGQIGPQGPQGLPGERGLSGLPGSPGPIGNRGLRGAPGETGQAG RPGAEGPPGPPGLVGPPGALGHIGETGPEGPVGKPGPPGIGGRPGDKGPPGVSGAAGPIG SPGLSGPPGPIGPTGPTGERGPKGEMGPQGVEGPQGPRGKPGPAGLEGIKGDRGEEGQKG AKGHRGFTGLQGLPGAPGLVGEKGIPGLQGPPGKDGEPGVRGNPGREGSPGPIGPAGNPG PRGPPGEEGRHGLIGPPGPPGPPGPPGDVGFGYDAASLAAFIGQGQTKGPDSLGDEPPRI FSKDITEKERRELLLKAYENLKSSFQKLVKPDGEKNSPAKTCRDLFVAYPDKLSGEYWID PNEGDIRDAILVYCDAEKRATCILPNPSRSPNITHITEQQETWLSEIDNGMKITYKADSN QISFLQLLSKHANQNITYHCKNSVAYFDYERKTYRRSLKLLAWNDAELSPRGNQRLRYEM IMDECRLHQNHWGKTVVSYETDKPVRLPIIDVALRDIGNPDQSFSIEIGPACYD NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atgaagcggcaggctctagagctgatcacgggacttcttgtggtccagctgctgttgccc ttgccgaatcaagtgaatgccgtaaaaaagcggttgaggaaacaaagatccaagccgcag gagcttcaaggtcagcagcctggcaccgattacgattatgaattttacgataattacgac gaatacgaggaaaagaacgagacgacaacgttaccaccgtcgcgattttcaggatggcca gaagcaccggaaacatttttgagacgaggaacacctacagatctaccggctcccacgaca actcaattttctgatcataaggagactagttcgacatctgaccaggatcattcagtttca cctacggagatcttgccgggagaaagtatatacagttctgtagctataccaggaccacgg ggtgatcctggtcgacctggagacgctggccgtcctggagatgtaggatttcctggacaa cccggtatccctggaactccgggatcacctggacttccaggacctgtacctgatgtatct ctatattatcaacaattggctttgtctcaagcaaatgaagataaaggtccatcaggtgca gcagcgtctttatatggaccagaggcttactttcaaatgcaagtaggcccgatgggtcct cgaggtcctccaggtgcacccggtgctcctggtcctcaaggttttcaaggtgcacgaggt gaaagcggcgaaatgggtccgccaggtcctccaggcacatcaggtcctaggggcttacca ggactgcctggaaaagacggtatcaatggagaagatggtgagaccggttcaccaggatcg cctggttctcccggaccacgtggtcttccaggaatacctggacttccagggctaaaaggt catcatggttttcctggtctagatggtgccaaaggtgaacaaggagtttctggtgaaaaa ggatctacgggctcgcctgggccgatgggaccagtaggatcgatgggtccagcaggacct cgcggtgaaagaggtagagaaggtccaccaggtcctcccggattgagaggtctcgacgga attgctggatcacctggacaacctggtgctgtaggtaaatctggctcaccaggctttcca ggtaatcctggagtcaaaggtgatcaaggaccagagggaccgccaggaagtcagggttta caaggtccgcgaggcgaaagtggccgtccaggacaacctggtgagactggtccacaaggt cctcaaggtaaagatggaacacctggtgagaagggagccactggatcagtaggactcgtt ggtgtacctggatttccgggcgctcgaggtcaacccggaacaccgggtaatcctggaatt tctggcgctaaaggagcacctggacttcctggtgatagaggttttaaaggagatgctgga gtgaaaggtgatcctggaatgcctggtccgcgtggacttccaggacctcctggaaatgag ggcaaaagaggcaaaagaggtatgcgtgggccaattggtgctgcaggacctcttggagaa cgtggcgcacctggtgtacgtggtcttcctggctcggatggtcccgtcggatctaaagga caatctggtgatcgtggccctgcgggagttgttggacccaaaggtgctactggagatcct ggacgacctggaccgtcaggattacaaggtgcacgtggtttaatgggaaggcctggagcc tctgggaaaccaggtaatcctggagaacgtggaattcaaggtgcagatggcaaacctgga gaacagggaccacctggaccgcagggtttaccaggaccattaggattaccaggggaaaga ggatatcctggagaacgtggaaaagatggtgaacctggaaatccaggttcgcctggtcca aggggagatatcggtaaagaaggacctcctggagtacagggtccaccaggaccaccagga agcgacggcgcacgaggtcttccgggagttgtcggccctagaggttttcaaggtcttcca ggcgcagccggtaatccgggcgttcctggtaaggacggagaagcaggagtacaaggacct tccggtccgccgggattagtgggtaatagaggagagcgaggatttccgggagaaagaggg ctcatgggacctccagggcctatgggttccagaggagaaaccgggacacaaggcgctgat ggtctcattggtttaccaggacttaaaggagataaaggaagttttggttcaccgggatta ctaggacttcctggtgtgagaggattacccggagaacctggacataaaggagagagaggc acatctggaccaatcggtcctgaaggtccaccaggacatattggagagcgcggtccacaa ggagaagttggaccccctggccctcctggagaaccagcagaacgaggcgatccaggtcct cctggtcccgttggtgagcccggagctcatggtaatccaggcgaaagaggccctcatgga ttacagggctcgcaaggttttccaggtccacaaggattaattggacttcctggtctgaaa ggcgatcgcggatatccaggtttaaaaggagaacaaggaaattcaggactacctggcagt cgcggcgagattggattacctggacctattggacttactggtgctaagggaattagaggt gaacctggtgcacgaggtgaacccggtttaatgggtccacctggtatcgtgggacatgtt gggccatcaggtccaccagggaacatgggatcacctggtgctcctggattgcccggtgtc aaaggtgacgcgggcgatactggacgtcctggaaatccaggtccaattggtaaccctggt ctacctggaatagatggaattaaaggtgaaagtggatccccaggccctcaaggacagata ggtcctcaaggacctcaaggtctacccggggagagaggtttatcaggattacctggttct cctggcccaataggaaatagaggattacgcggagcacccggtgaaacaggacaagccggc agaccaggagcggaaggtccacccggacctcctggtttagtaggtcctccgggtgctctt ggtcacataggagaaaccggcccagaaggaccagttggaaaaccaggaccaccgggtata ggaggccgaccaggtgataaaggaccgcctggagtatctggtgctgcaggaccaataggt tctcctggattatcaggaccgcctggccctattggacctaccggacctactggagaacgt ggtccaaaaggtgaaatgggaccacaaggtgtggaaggtccacagggaccacgaggaaaa cctggtccagctggtctcgaaggaataaaaggagatcgcggagaggaggggcagaaaggg gccaagggacatcgaggatttactggtttacaaggattgcctggagctcctggtttagta ggagaaaagggtatacctggtttacaaggacctcctggtaaagatggagaaccaggtgtt agaggtaatcctggacgggaaggtagtccaggtcccatcggacctgcgggaaatcccgga ccaagaggtccacccggggaagaaggtcgacatggattaataggtcccccaggacctcct ggaccacctggtcctcctggggatgtcggttttggttacgatgctgcatctctagcagca tttataggacaaggccaaacaaaaggaccagattcactcggtgatgaaccaccaagaata tttagtaaagatatcactgaaaaggaacgaagagagttacttttgaaagcgtatgaaaat ttaaaatcgtcgttccaaaaattggtgaagccagatggtgaaaaaaattcgcctgctaaa acctgtcgtgatctatttgttgcctacccggataaattatctggcgagtactggattgat ccaaacgaaggggatattcgagatgcaatcttggtatattgcgatgctgaaaaacgcgca acttgcattttaccgaatccgtcacgttcaccaaatatcactcacatcactgagcaacag gagacttggctgagcgaaatagataacggcatgaagattacatacaaggcggacagtaat caaatcagtttcctgcaattgctttcgaaacacgcaaatcagaacatcacgtatcattgc aaaaatagtgtggcttacttcgattacgagagaaaaacgtacagaaggagcttgaagctt ttggcttggaatgacgctgaattatcaccacgaggcaatcagcgtctcagatacgaaatg ataatggatgaatgcaggctccaccaaaaccattggggtaaaactgttgtttcatatgaa acggataaaccagtaagacttcctatcatagacgtggctttgcgtgatatcgggaaccca gatcaaagtttttccattgaaattggtccagcttgttacgattaa

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