Sodalis praecaptivus: Sant_1561
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Entry
Sant_1561 CDS
T03004
Name
(GenBank) Spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sod
Sodalis praecaptivus
Pathway
sod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sant_1561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sod02000
]
Sant_1561
Transporters [BR:
sod02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Sant_1561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
ABC_ATPase
AAA_22
Rad17
AAA_25
AAA
Mg_chelatase
AAA_16
OB_MalK
RsgA_GTPase
nSTAND3
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHF76619
UniProt:
W0HS62
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All DBs
Position
1783288..1784382
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AA seq
364 aa
AA seq
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MQRSVEVCLTHLTKHYGSTVAVDDLSLTVPAGEILVLLGPSGCGKTTCLRMVAGLDTPTR
GDIRVDGRSIARTAVHQRNVGMLLQNYALFPHLTVAENIAFGLKMRGLSRADISDKVNAA
LDRVRLAHLHDRLPEQLSGGQQQRVSLARALVIEPDILLLDEPLGALDKGLRESLQWEIR
QLQQRLGLTTLLVTHDQDEALTLADTIAVMHNGRLEQCARAADIYQKPATAFVAGFLGAS
NFLTARVVARGADHVQLAADAGLTLTVAACPSEAQRVTVTLRPEAIRLAPLPSPAPIGEA
NSATGRIAQVVYRGYMLHFYVTLDGGTQMQVWMQSSGDGAPPAFQVGEPVMLRWPRESNH
VLPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttccgttgaagtctgcctgacgcatttgaccaagcattacggtagcaccgtg
gcggtcgatgatctgtcgttaaccgtgccggcgggggaaatccttgtgctgctcggcccc
agcggctgcggtaaaaccacctgtttgcgcatggtggcaggtttggatacgcctacgcgc
ggcgatattcgcgtcgacggtcgctcgatcgcccgcacggcggtgcaccagcgtaacgtg
ggcatgttattgcagaattacgcgctctttcctcatcttaccgtcgctgagaatatcgcc
ttcggcctgaaaatgcgcggtctgtcgcgcgctgacataagcgataaggtcaatgcggcg
ctcgatagagtgcgtctcgcgcatctgcacgaccgtttacccgaacaactgagcggcggc
cagcagcagcgcgtttcgctggcccgcgcgctggtcattgaacccgatatcctgctgctt
gacgagccgctgggggctttagataaagggttgcgggaaagtttgcagtgggaaattcgc
caattgcagcagcggctagggctgaccacgctgttggtgacgcacgatcaggatgaagcg
ttaacgctggcagatacgattgccgtgatgcacaacgggcgcctcgaacagtgcgcccgc
gccgccgacatttaccaaaagcccgccacggcctttgtcgccggttttctcggcgcgtcc
aatttcttgaccgcccgcgtggtcgcccgcggggcggaccatgtccagttggccgcagac
gccggtctgacgctgaccgttgccgcctgtccctccgaggcgcagcgagtgacggtgacc
ctacggccagaggccattcggttggcgccgctgccctcgccggcgccgatcggtgaagcc
aatagcgctaccggtcggatagcgcaggtcgtctatcgcggttacatgctgcatttttac
gttaccctcgacggcgggacgcagatgcaggtatggatgcagtcatcgggggacggcgct
ccgcccgcatttcaggtcggtgaaccggtgatgcttcgctggccccgggaaagtaatcac
gtccttcccgcttga
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