Sodalis praecaptivus: Sant_2627
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Entry
Sant_2627 CDS
T03004
Symbol
msbA
Name
(GenBank) Lipid transporter ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sod
Sodalis praecaptivus
Pathway
sod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sant_2627 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sod02000
]
Sant_2627 (msbA)
Enzymes [BR:
sod01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Sant_2627 (msbA)
Transporters [BR:
sod02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Sant_2627 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
RsgA_GTPase
AAA_22
AAA_21
APS_kinase
AAA_16
DUF5906
nSTAND3
ABC_membrane_2
AAA_29
MMR_HSR1
AAA_30
Cytidylate_kin
AAA_18
SLFN-g3_helicase
AAA_25
6PF2K
DUF87
Activator-TraM
AAA_24
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AHF77655
UniProt:
W0HZL2
LinkDB
All DBs
Position
complement(3038559..3040307)
Genome browser
AA seq
582 aa
AA seq
DB search
MLNDKDLSTWQTFRRLWPMISPFKTGLIVAAIALILNAASDTFMLSLLKPLLDDGFGKAN
SNILVWMPLVVIGLMVLRGVSGFVSSYCVSWVSGKVVMNMRRRLFNHMMDMPVSFFDQQS
TGTLLSRITYDSEQVASSSSGALITVIREGASIIGLFAMMFYYSWQLSLILVVIAPVVSF
AIRQVSKRFRQISKRMQNTMGQVTTSAEQMLKGHKEVLIFGGQKVENERFNSVSNRMRQQ
GMKMVAASSVSDPLIQFIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDMETEKDEGTVEVERVKGDIAFEHVTFSYPGKETPSLH
DISLSIPAGHTVALVGRSGSGKSTIANLLTRFYDIQQGQILLDGTDLRAYKLASLRNQVA
LVSQNVHLFNDTIANNIAYARKATYSREQVENAARMAYAMDFIEKMDMGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQKALDALQKNRTSLVIAHRLS
TIEKADEILVVEEGRIVERGNHEELISRQGVYAQLHRLQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacgataaagatctctccacctggcagaccttccgtcgcctttggccgatgatc
tcacctttcaagacaggtctgatcgtcgcggcgattgccctgatactcaatgccgccagc
gatacctttatgctatcgctgcttaaacccctgctggatgacggatttggcaaagccaac
agcaatattctggtctggatgccgctggtggtgattggcctaatggtgctgcgcggcgtc
agcggctttgtctccagctattgcgtatcctgggtttccggcaaagtggtgatgaacatg
cgccgccggctgttcaaccacatgatggacatgccagtgtcttttttcgaccagcaatcc
accggtaccctgctttcgcgcattacctatgattccgaacaggtagcgtcatcctcctcc
ggcgcgctgattaccgtgattcgtgaaggggcatcgatcatcggcctgtttgcgatgatg
ttctattacagttggcaattgtcgctgatcctggtggtgattgcgcccgtggtatcgttt
gccatccggcaagtgtcaaaacggttccgccagatcagcaaaagaatgcaaaacaccatg
gggcaggtgaccaccagcgccgagcagatgctcaaagggcataaggaagtgctgattttt
ggcggccagaaggtggaaaacgagcgtttcaacagcgtcagtaaccgcatgcgccagcag
gggatgaaaatggtggccgcctcttcggtctccgatccgctgatccagtttatcgcctcc
ctggcgctggcctttgttctgtatgccgccagctttccgtcggtgatggaaaccttgacc
gccgggactatcaccgtcgtgttttcgtcaatgattgccctgatgcgcccgctgaaatcc
ctgaccaacgtcaacgcccagttccagcgcggtatggccgcttgccagacgctgttttcc
attcttgatatggaaaccgaaaaggatgaggggacggtggaggtcgaacgcgttaaaggg
gatatcgccttcgaacacgtcaccttttcctatcccggtaaagagacgccttcgctgcac
gacatcagtctgagcattccggcggggcatacggtggcgttagtggggcgatccggctcc
ggtaaatcgaccatcgccaatttgttgacgcggttctacgatatccagcagggccagatc
ctgctcgacggtaccgatttgcgcgcctataagctcgcctcgctgcgtaatcaggtggcg
ctggtttcccaaaacgtgcatttgtttaacgatactatcgccaacaatatcgcttatgcc
cgcaaggcaacctactcccgcgagcaggtagagaacgctgcccgcatggcttacgccatg
gatttcatcgaaaaaatggacatgggcctggatacggttatcggcgaaaacggcgtcttg
ctctccggcggccagcgtcagcgtatcgccatcgcccgcgcgctgctgcgcgattgcccg
atacttattctcgacgaggccacctcggcgctggataccgaatccgagcgggcaattcaa
aaagcgctggatgcgctgcaaaagaatcggacctccctggtcatcgcccatcgcctgtcc
accatcgaaaaagccgatgaaattctggtggtggaggagggacggatcgtcgaacgcggc
aatcatgaggagctgatatcgcgccagggggtttacgcccagcttcaccggttacagttc
ggccaatga
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