Spinacia oleracea (spinach): 110784955
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Entry
110784955 CDS
T05137
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110784955
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
soe01009
]
110784955
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110784955
Protein phosphatases and associated proteins [BR:
soe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110784955
Spliceosome [BR:
soe03041
]
Common components
Common spliceosomal components
SR proteins
110784955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110784955
NCBI-ProteinID:
XP_021845087
UniProt:
A0A9R0I9M1
LinkDB
All DBs
Position
6:complement(138458039..138462104)
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AA seq
222 aa
AA seq
DB search
MSLSREESRSPSPDGSASPGINPRHQRSRSRSRSPPPARSRSGSPVDTSNPGNNLYVTGL
STRVTNTDLEKFFSKEGKVLECCLVTDPRTKESRGFAFVTMETREQAERCIKYLHRSVLE
GRLVSVEKAKRSRGRTPTPGRYQGLRKERGGPRGGGRGPRRRSRSFSPPRRRYDRGHYER
DPYPRDRRGRSRSPYGRRPDDYPDSYRRRRERSVSAGRGGYP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttcgagggaagaaagtaggtctccttcaccagatggttctgcctcgcctggg
attaatcccaggcatcaacgatcgaggtcgaggtcaaggtcaccacctcctgcacgtagt
cgatctgggagtcctgtagatacatccaatcctggaaacaatctgtatgtgactggctta
tccacaagggtgactaacactgatctggagaagttctttagcaaagaagggaaggtcctc
gaatgctgtttggttactgatcctcgtaccaaagaatctcgtggctttgcatttgttact
atggaaactagagaacaagctgaaagatgtatcaaatatttgcatcgctctgtgcttgag
ggccgattggtctccgtagaaaaggcaaaacggtctcgtgggaggacaccaactcctggt
cgataccagggtctgaggaaagaacggggaggaccaagaggaggaggtcgaggtcctcgt
agacggtctcgcagcttttcaccaccgcgacgacggtatgatagaggtcattatgagaga
gatccttatccacgtgataggcgagggagatcacgctctccttatggtaggagacctgat
gattatccagactcataccggaggcgtagggagcggtccgtgtcagctggtcgtggtggc
tacccttga
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