Spinacia oleracea (spinach): 110785137
Help
Entry
110785137 CDS
T05137
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110785137
Enzymes [BR:
soe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110785137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
110785137
NCBI-ProteinID:
XP_021845273
UniProt:
A0A9R0JSS6
LinkDB
All DBs
Position
5:26578835..26583638
Genome browser
AA seq
501 aa
AA seq
DB search
MLQRTHIHVILIVLFSCNFLFSFVSSSAFNLTLQHEHPYPEHIVQEFHRRVNASLSRRKT
LESLQEKDQISCGTGNPIDDCWKCDPNWASDRQHLADCAIGFGYKALGGKGGPIYVVTDS
SDPNPHKPKPGTLRDAVSQPGPVWIIFGSDMLIKLKYPLVVTSFKTIDGRGAHVEITGGG
CIIIEHVTNVIVHNINIHHCYPANSDGDGLHIFSSSNVWVDHCTLSNCADGLIDCTVGST
AITISNNHFFNHDKVMLLGHSDDYFGDRGMQVTVAFNRFGEELNQRMPRCRFGYFHVVNN
DYSSWVEYAVGGSSRPTINSQGNRYIAPPNPNAKEVTRRLDADGQEWEGWNWRTEGDLMM
NGAFFVPSGDGVNPQYSLASSMEPKPAAFIDQLTLYAGILLPNRGIANPGSRGSGISSGG
GLIPGGGGAVPGGAGGVPGGMYGTGGGYNNPPGEGDYYEGGEGGLFFSSAPPSSPCCQAF
IILSTLLILTLRFTTNGNFLL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagaacccacattcatgttattctcattgtcctgttttcctgcaattttctc
ttctcttttgtttcgtcttccgcttttaatcttactctccaacatgaacacccttatcca
gaacatattgttcaagaatttcacaggagagttaatgcttctctaagcaggaggaaaacc
ctagagtccttgcaagaaaaggaccaaatttcttgtggaacgggtaatccaattgatgat
tgttggaaatgtgaccctaattgggcttctgaccggcaacacttagctgattgtgcaatt
gggtttggttacaaggcacttggaggcaaaggtgggcccatttatgtagtcacggactcc
tcggacccgaacccacataagcctaagccggggaccctaagagacgccgtgagccaacct
ggcccggtttggattatatttggtagtgacatgcttattaagctcaaatatcccctagta
gtcactagctttaaaactattgacgggcgtggtgctcatgtggaaataaccggtggaggg
tgcataataatagagcatgttactaatgtgatcgttcacaatattaacatacatcattgt
tatccagctaactcagatggtgatgggctacatatattttcgtcgagtaacgtttgggta
gaccattgcacgttgtctaattgcgcggatgggctaattgattgtacggtgggatcaacg
gctatcacaatatcgaacaaccacttctttaatcacgataaggtgatgttacttgggcat
agtgacgactattttggtgatagagggatgcaggtaacggtggcattcaatcgatttggt
gaggaattgaatcaaaggatgcctaggtgccggtttgggtatttccatgtggtgaataac
gattactcgagttgggttgagtacgcggtaggtggtagctctagacctactatcaacagc
caaggaaatcggtacattgcaccacccaatccaaatgccaaggaggtaacaagaaggttg
gatgcagatgggcaagaatgggaaggttggaattggagaacagaaggtgatttaatgatg
aatggagccttctttgtgccatcaggtgatggggttaatcctcaatattccctagcctca
agtatggaacctaaacctgctgcttttattgaccaacttactctctacgccggcatcttg
cttcctaatcgaggcatagcgaatcctggatcaagaggtagtggcattagtagcggtggt
gggctaattcctggtggcggtggtgcggtccctggtggcgctgggggtgtccctggaggc
atgtacggcacgggaggcggttacaataaccctccaggagaaggagactactatgaggga
ggagaaggtggattgttttttagcagtgcaccaccatcttcaccttgttgtcaagcattc
atcattttgtcaacattacttattttgactttacgttttaccacaaatggtaattttctt
ttatag
DBGET
integrated database retrieval system
