Spinacia oleracea (spinach): 110787925
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Entry
110787925 CDS
T05137
Name
(RefSeq) pre-mRNA-processing protein 40C
KO
K12824
transcription elongation regulator 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110787925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110787925
Spliceosome [BR:
soe03041
]
Complex A
U1 snRNP components
U1 related factors
110787925
Complex B
110787925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
Motif
Other DBs
NCBI-GeneID:
110787925
NCBI-ProteinID:
XP_021848249
UniProt:
A0A9R0IFA7
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Position
2:complement(98266412..98288100)
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AA seq
927 aa
AA seq
DB search
MGYSEVVNNSLPPGAIPQQPVRPPVAQFVPGNAASQMMPPPVPIPQRESSAATNFTYSAN
YQSGSKQEVSTPTAATGVLKEASPTSSSGLSPVQASSSSETPVSAASNVSQVATPISGSP
SFTLHSGFPAGSVIPGLPGQAGSTVLSSSPSVSSAVMGSFAPAVLRSPVVPLPSNPAFQP
QVYPLYASMPSTGASPQPIWLQPPQMGGLRPPFLPYPPAFPGPFGLAARGVSLPSVPVPD
AQPPGITPVNNLGGMRPSSVSSSVIQMAHSSMMQSEVPSPGTVNSKQTSDAGTNGNYVQN
DHLDAWSAHRTETGALYYYNAITGESTYEKPSAFKGEPAKAITQPTPVAWEKVNGTDWAL
VSTNDGKKYYYNTKNETSSWQVPPEVTELRKKQENDNAKENSMSVPNSNELHEKGSGPTS
ISAPALNTGGRDAIALRASGAPGSSSALDLIKKKLHESGAQVTSFSTISSGSALLEVNGS
KTVDPTAKGLQSEGSKDKPRDGEGDGNISDLSSDSEDEDSGPTKEERIAQFKDMLKERGV
APFSKWDKELPKIVFDPRFKEIPTYAERRSLFEHYVRTRAEAERKEKRAAQKAAVEGFKQ
LLEEAKEDIDHTTTYHTFRKRWGHDQRFEALERKDREVFLNERVLSLKRVAEEKIRAERT
VVVSNFKSMLRERGDVTASSRWSRVKDGLRDDSRYKAVKHEEREALFNAYISELKAADDE
VEREAKAKREEQEKLKERERELRKRKEREEQQMERVRSKVRRKEAVASYLALLVETIKSH
QASWTESKPKLVKDPQGRASNPDLDESDLERLFREHVKMLYERCACDFRALLVEKITPEA
ATRETEDGKTVLNSWSTAKKFLKSDPRYTKMPRKDREALWKRHAEELQRKQKGAVEQKGD
QYNESKNRNANDSGRPLSVSRSGQDWR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggggtattcggaagtggtcaacaactctttacctcctggggcgattcctcagcagccc
gtgcgtcctccagtggcgcagttcgttcctggaaatgccgcttcacagatgatgccacca
ccagtgccaatcccacaaagagaatcatcagctgctactaactttacttatagtgcaaat
tatcagtcggggtccaagcaggaggtttccacacccactgctgcaactggtgtcctaaaa
gaagcaagtccaacatcttcatctggtttgtcacctgtacaagcttcttcaagttccgag
acacctgtatctgctgcgtctaatgtcagtcaagtggcaacaccaatttctggttccccg
tcatttacattgcactctgggtttcctgctggatcagtgattcctggcttgccagggcaa
gcaggttcaactgtactgtcctccagcccttcagtctcttccgcagtaatgggttctttt
gcacctgcagtattaagatcgccagtggttccgcttccatcaaatccagcttttcaacca
caagtatatcctctgtatgcatctatgcctagtactggtgcttcacctcaaccaatttgg
ttgcagcccccacaaatgggtggactgaggcccccatttttaccatatcctcctgctttt
cctggcccctttggtttggctgcacgtggtgtgtctcttccttctgttcccgtcccagat
gctcagcctcccggtattacacctgttaataatcttggtggtatgcgcccatcttccgtc
tcttcttctgttattcagatggcccatagttcaatgatgcaatccgaagtaccatctcct
gggactgttaacagtaagcagacttctgatgctggtacaaatggtaattatgttcagaat
gatcacttggatgcatggagtgcacatagaactgaaaccggggctttatattattacaat
gctataactggggaatcaacgtatgaaaaaccttctgctttcaaaggagagcctgcaaaa
gcaattacacaacctactcctgttgcatgggagaaggtgaatggcactgattgggcactg
gtctccaccaatgatggaaaaaagtactattataacaccaaaaatgagactagcagctgg
caagtaccaccagaggtaactgagttgagaaaaaagcaggaaaatgacaatgcaaaagaa
aattcaatgtcagtaccaaattccaacgaattacatgaaaaaggatctggtcctactagt
ataagtgcccctgctctcaatacaggtggtcgtgatgctatagcccttagagcctctggt
gctccaggatcatcttctgcccttgatttgattaaaaaaaagcttcatgaatcgggagct
caggttacctctttctcaactatttcgtcaggatcagcattgttagaagttaatgggtct
aaaacagttgaccctacagctaagggcttacagagtgaaggaagcaaggataagccaaga
gatggtgaaggagatggcaatatatctgacttgtcatcagattcggaggatgaagatagt
ggaccaaccaaggaggagcgcatagctcagttcaaggatatgcttaaagaacgtggagtg
gcacctttctcaaagtgggataaagagttaccgaagatcgtgtttgatccacgcttcaag
gaaattcctacttatgccgagcgtagatcgttattcgaacattatgttcgaacacgagct
gaagcggaacgtaaagaaaagagagctgctcaaaaggctgcagttgagggtttcaagcaa
ttgttagaagaagcaaaggaggatattgatcatactactacttatcatacatttaggaag
agatggggccatgatcagcgatttgaggccttagagcgcaaggatcgagaagtttttctc
aatgagagggtcctttcactaaagagggtcgcagaggaaaaaatccgagctgaacgtaca
gttgtcgtttctaatttcaaatccatgcttcgagaaagaggagacgtaactgcaagttct
cgttggtcaagggtgaaggatggccttcgggatgacagtagatacaaagctgtcaagcat
gaagagcgagaggctttattcaatgcatacatatcggagttaaaggctgcagatgatgag
gtggagagggaagcaaaggcaaaaagggaggaacaggagaagttgaaagagagagaaaga
gaacttcgaaagagaaaagaacgagaggagcaacagatggaaagagtacggtcgaaggtt
cgtaggaaggaagcggttgcatcatatctagcattactagttgaaacaataaaaagtcat
caggcgtcttggacagagtcaaaacctaaacttgttaaagatccacaaggacgtgcatca
aatcctgatttggatgaatctgacttggagaggctatttcgagaacatgtgaagatgctt
tatgagaggtgtgcatgtgacttcagagctcttttggtggagaaaataactcctgaagca
gcaacaagggaaacagaagatgggaaaacagttcttaattcttggtctactgcaaaaaag
tttctgaaatctgaccctaggtatacaaaaatgccgagaaaagacagagaagcgctttgg
aaaaggcatgctgaggaattgcagcgtaagcaaaaaggtgctgttgaacagaagggagac
cagtacaatgaatctaaaaatagaaatgcaaatgattctgggaggcctttgtcagtatcc
agaagtgggcaggattggagataa
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