Spinacia oleracea (spinach): 110797406
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Entry
110797406 CDS
T05137
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110797406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soe03041
]
110797406
Spliceosome [BR:
soe03041
]
Common components
Common spliceosomal components
SR proteins
110797406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
110797406
NCBI-ProteinID:
XP_021858217
UniProt:
A0A9R0IZ19
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All DBs
Position
3:6975022..6980548
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AA seq
294 aa
AA seq
DB search
MSNRFSRTIYVGNLPSDIKEREIEDLFYKYGRILEVELKVPPRPPCFCFVEFEGARDADE
AIRGRDGYNFDGCRLRVELAHGGRGSGSSAGSERRGGGGGGGGGGGGAGGRYGASRHTEY
RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNSEDMKYAIRKLDDT
EFKNPWSKSYIRVKKHDRSPIRGRSRSRSRSRSRSRSKSRSRSRSPKRNRSKSLERSVSR
SPSRSRSASPVKSTRPKSRSKSKSPSKPRSKSPSKPQSRSRSRSRSRSRSRSPL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgtttctctcgtaccatctatgttggtaacctaccttcagatatcaaagaa
cgtgagattgaagatctgttttacaagtatggtcgtattttggaggttgaattaaaagtt
ccacctcgacctccttgtttttgcttcgtggagtttgagggtgcccgagatgctgatgag
gcgataaggggacgtgatggctacaactttgatggctgtcgcctaagggttgaacttgca
catggtggacggggatcaggatcatcagctggtagtgaacgtcgcggtggaggcggtgga
ggtggtggaggtggtggaggcgctggagggcgctatggtgcatcacgccatactgagtat
cgagtcattgtacgtgggcttccgtcttctgcatcatggcaggatttaaaggatcacatg
cgaaaagctggcgatgtttgctttgcagaagtttcacgtgacagtgaaggaactttcggc
ttggttgactataccaactctgaagacatgaaatatgctatccggaaactggatgacact
gaattcaaaaacccttggtcaaaatcttatattcgggtgaagaagcatgacagaagccca
attaggggtcgcagcaggagcaggagcaggagtaggagtaggagcaggagcaagagcaga
agcaggagtagaagcccgaaaaggaatagaagcaaatcactggaaaggtcggtgtcaaga
tcaccatccaggtcaaggtctgcatctcctgtgaaatctacaaggccaaagtctagatcc
aagtcgaagtccccctctaaaccacggtcaaagtccccctctaagccacagtcaaggtca
aggtcaaggtcaaggtccaggtcaaggtccagatcaccgctgtag
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