Spinacia oleracea (spinach): 110798816
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Entry
110798816 CDS
T05137
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
soe01002
]
110798816
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soe04121
]
110798816
Enzymes [BR:
soe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110798816
Peptidases and inhibitors [BR:
soe01002
]
Cysteine peptidases
Family C85
110798816
Ubiquitin system [BR:
soe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
110798816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
110798816
NCBI-ProteinID:
XP_056683968
LinkDB
All DBs
Position
5:29281946..29291287
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AA seq
509 aa
AA seq
DB search
MTRILVPRGSSGSSSSNNQTRTSLPSSSNQPIPSNPNVVIAVPDEVHEQVIANDLPENGS
SDDQGFDQSKNAGDDGADDLKIGNNENQVDNIRVFSGLKVTDHNSHETDALAGDNFQSEA
QSSQPPPPPIPPPKPSGSNSMLRRFVSGTSDSPRIGPSRRPAAWPAPARTSPSASRPSSP
RSHCESEGYNSADEQIPSFGSSYYDLERERQFEIDIRRAKGLEVKRMQEDGNCLFRAVAD
QVYGDSEAYDLIRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQALSEM
YNRPIHIYSYSTEPINIFHGNYDSDVPPIRLSYHHGNHYNSLVDPRRLSVGAGLGFSCLR
GRNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERTVMEASRAEYLAGNKS
KQHVGLRGSSTSIAEPSSSGARPSDGETEKESGSPDAMLSSSMRVVLTMGFGYLQVIEAY
SVFGDDVDSMVCYLLETSGSSRRKGKATE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggattttggttccgcgcggctcttctgggagttcttcatccaacaaccagaca
cgcacttcacttcccagctcttcaaatcaacctattccttccaaccctaacgttgtcatc
gctgttcctgatgaagttcatgaacaagttattgccaatgatttgcccgaaaatggttca
agtgatgatcaaggctttgatcagagtaaaaatgccggggatgatggtgccgatgatttg
aaaattgggaacaacgagaatcaagtggataacattagagtgtttagtgggctaaaggtc
actgaccacaatagtcatgagactgatgccttggctggtgataattttcaaagtgaagcc
cagagctcacaacctcctcctcctcctattccgcctccaaaaccttcaggatcaaactct
atgttgagaagatttgtgtcagggacttcagattcccctcggattggaccttctagaagg
cctgctgcgtggccggctccagctcggacttctccatcagcatccagaccatcctcacca
agatctcattgtgaaagcgagggctacaatagtgctgatgagcaaatcccttcctttgga
tcctcatattatgaccttgagagagagcggcagtttgagattgatattagacgtgctaaa
ggtttggaagttaagaggatgcaagaagatggtaattgtctatttagggctgttgcagat
caagtctatggggattcggaggcatatgatttgatcaggcagatgtgtatagattatatg
gagcgcgagagagatcatttctcacagtttattacagaaggctttacatcttattgtaag
aggaaacgacgggacaaggtttatggaaacaatgtggagatccaagccttatcagagatg
tataatagacccattcatatatactcttatagcacagagcctattaacatatttcatggg
aactatgactctgatgtgcctccaatccggctaagttatcatcatggtaaccattataat
tcacttgtggatccccgacgattgagtgttggggcagggcttggattcagctgtcttcgg
gggagaaatgtggacaaggatcaggtaaaagctgccataaaagctcaacaagaccaacag
atagataatgcactcctggctgaaggacgattttattccgacctagagctcacagaaaaa
gaaattgaacgtacggtaatggaagcttctcgggctgaatatctagctggaaacaaatcg
aagcaacatgttggtctaagaggatcctcgacatctattgcagaaccatcatcctctgga
gccaggccatcagacggtgagaccgaaaaagaaagtggttcgcctgatgcaatgctgagc
agcagcatgcgggtggtgctgacaatgggattcggctacctccaggttattgaggcctac
agtgtatttggggatgatgttgattctatggtttgttacctgttagagaccagcggtagc
agcaggcgcaaagggaaggctactgaatga
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