Spinacia oleracea (spinach): 110801605
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Entry
110801605 CDS
T05137
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
soe
Spinacia oleracea (spinach)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
Lactamase_B_2
UBA_4
RMMBL
Motif
Other DBs
NCBI-GeneID:
110801605
NCBI-ProteinID:
XP_021862655
UniProt:
A0A9R0J9V0
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Position
1:complement(115993436..116007058)
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AA seq
1413 aa
AA seq
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MSTAKTLTLNTSERYLQSQNPLPSSSPSQLPSFPANFPPSKLIPKTRFIIDGFRHSGEFS
ISYFLSHFHADHYTGLTSTWSRGIIFCSVTTARLVVKVLGVSALSVIGLPINETVVIDNC
EVTLIDANHCPGAVQFLFKVPVSGGKFERYVHTGDFRFCSDMKLIPFLSEFVGCDAVFLD
TTYCDPKFVFPVQEESIDYVVSVIERSRSENRNASKSVLFLVATYVIGKERILLEIARRC
DCKIHVDSRKMEILRELGYENEGVFTEDESSSDVHVVGWNVLGETWPYFRPNFMKVNEIM
VGKEYKKVVGFVPTGWTYEVKKNKFAVRTKDSFEIHLVPYSEHSNYNELREYVKFLKPKR
VLPTVGFDVENVDSKHALKMQKHFAGLVDEMANKQEFLMGFYRVPQGKGKVKVDDLAPEL
DKDIEQFKEEFDVCELKNGREADSGSTCSVASTHEPDSQDLTPFSDKEKDEIMQELRDCL
PVWVSVDQLLELVKTYGRNIVDAVSHFYEHETEFHERSGESLPSSQKSESPCTKLLNPPS
VESSLQTPVKSPNQKAKFPPLKQSVASSVSPGKRKKNPQNKKNKKGKLNSNLESGGIKQS
TITKFFSKGSRVCQGITATPLSGISTEDKSLTSEHSVKQYKEELEQFIQIIDGSESIKGY
AAELLEKAEGNVGLALDMYYNNSEVHLGGNQKGVDASSKSLPCEGLEESISSQGKERSEA
GNKVYQSAQDSLADSTAVNYVSLPPETYSPIEHACWKHGQPAPYIHLARTFDIVEGERGK
IKATSILSNMFRSLLALSPDDVLPAIYLCTNKIAADHENMELNIGGSLVASALEEACGIN
RAKIREMYNNFGDLGTCYSIISHYHHSLCIVIMCMILNLIGDVAQECRKTQSLLLPPSPL
LIRDVFSILRKISVQTGSGSAGRRKSLIVSMMRSCREKEMKFLVRTLVRNLRIGAMMRTV
LPALAQAVALNGYDEAGKVPKELLQGLSAAAVEVYNILPDLNLLVPSLMSEGIKFSTTTL
TMVPGIPIRPMLAKITNGIAQALKLFQNKAFTCEFKYDGQRAQIHKFDDGSVRIFSRNGD
EMTTKFPDLVHIIQESCKTSAESFIIDAEVVGIDRNKGIKFLSFQELSARERGSKASLVS
LDRIKVDICVLVFDVMFVNGEKLLAVPLRQRRQCMNDLFKGEKPGFLEYAKETTVEADEA
RPDCEATLTKINAFLEDAFQSSCEGIMVKSLDVDAGYFASKRADSWLKVKRDYMDGVGDS
LDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEYESLCRVMTGFSDAFYKEMKDLLSGDK
ILTRKPLYYRTDEVPDMWFSAEMVWEIRGADLTVSPVHKAAVAIVHPSRGISMRFPRFVR
SLSDRRPEDCSTSTEVAEMFHSQTRKMDLSGAR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgccaaaaccctaaccctaaatacatccgaacgctatcttcaatcgcaaaac
ccccttcctagctcatctccgtcgcaactcccttcatttcccgccaatttccccccctca
aagctcatccccaaaactcgcttcatcatcgatggcttccgacattctggcgaattttct
atctcctacttcctctcacacttccacgctgatcactacactggcctcacttcaacgtgg
tctcgaggtatcatcttctgctctgtaaccaccgctcgcctcgttgtcaaagttctcggt
gtttcggcactgtccgttatcggattgccaattaacgagaccgttgttatagacaattgt
gaggtaactttaattgatgctaatcactgccctggtgctgttcaatttctgtttaaagtt
cctgttagtggtggtaaatttgagcgttatgttcatactggtgattttaggttctgtagt
gatatgaagttgataccttttttaagtgaatttgttggttgtgatgctgtttttctcgat
acaacgtattgtgatcccaaatttgtgttccctgtgcaagaggagtcgattgattatgta
gttagtgtgatagaaaggagtaggagtgagaataggaatgctagtaaaagtgttttgttt
cttgttgcgacatatgtaatcggaaaagagaggattttgttggaaatagcgcgtaggtgt
gactgtaagatccatgtagatagtaggaagatggagattttgcgggagttaggttacgag
aatgaaggggtgtttacggaagatgaatcctctagtgatgttcacgttgttgggtggaat
gttttgggtgagacttggccatattttcggcctaatttcatgaaggtgaatgaaattatg
gttggaaaagagtataagaaggttgtgggatttgttcctactggatggacttatgaagtg
aagaaaaacaagtttgcagtaagaacaaaagattcgtttgagattcatctggtgccttac
agtgaacattccaattacaacgagcttagagaatatgtgaagtttttgaaaccaaagcgt
gtgcttcctacagttggctttgatgttgagaatgtggacagcaaacatgctctaaaaatg
caaaagcattttgcaggattggtggatgagatggccaataagcaagaatttttgatgggt
ttttaccgtgtaccccagggaaaaggaaaggtcaaggtagatgatttggcacctgagttg
gacaaagacatagaacaattcaaagaggagtttgacgtgtgcgagctgaaaaatggtcgt
gaagctgactctggttccacgtgctctgtagcttctacgcatgaacctgattcacaagat
ttaaccccttttagtgataaggaaaaagatgagatcatgcaagagctacgggattgtttg
cccgtatgggtttctgtagatcagttgctagaacttgtcaaaacatatggcagaaatatt
gttgatgctgtatcgcatttttatgaacacgaaacagaatttcatgagcggagtggagaa
tctcttccttcatcacaaaagtcagaaagtccttgcacaaaacttcttaatcctccttct
gttgagagcagtcttcagacaccggtgaagtcacctaatcaaaaggccaaatttccgcca
ttgaagcagtcagttgcaagcagtgtttctcctggaaaaagaaagaaaaatcctcaaaat
aagaagaataagaagggaaaattaaactcaaatcttgaatctggtggcataaagcaatct
acaataaccaaatttttcagtaaaggtagtagggtttgtcagggaatcaccgctacccct
ttgtctgggataagtactgaggacaagagtctaacttctgaacattcagttaaacaatat
aaggaagagctggagcaatttattcagataattgatggcagtgaatcaataaaaggttat
gctgctgaactgttagaaaaggctgagggaaatgtaggtttggcactggatatgtattac
aataattctgaagttcaccttggtggtaatcaaaaaggggtagatgctagtagcaaatca
ctaccatgtgaaggtctagaagaaagcatctctagccaagggaaagaaaggtctgaagct
ggcaacaaggtttatcaatctgcacaagattcattggctgacagtactgctgttaactat
gtatcactaccaccagagacgtattctccaatagaacatgcttgctggaagcacggtcag
cctgctccatatatacacttggcccggacttttgacattgttgaaggtgaaaggggcaaa
attaaagctacatcaatactttccaatatgtttagaagtttgctggctttgtctcctgat
gatgttctacctgctatttatctctgcacaaataagatcgccgctgaccatgaaaatatg
gaactaaacattggtggaagtttggttgcatctgccctagaagaggcatgtggaattaat
agagctaagataagggaaatgtacaacaattttggtgatcttggtacgtgttactcgata
atttctcattatcatcactctttgtgtatagtaatcatgtgcatgatactgaatctaata
ggtgatgttgcacaagagtgtcggaaaacacagtcactacttcttcctccttcacccctt
ctgattcgagatgtattttccatacttcggaaaattagtgtacagacaggcagtggaagt
gcaggtaggaggaaaagcctaattgtcagtatgatgcgatcttgcagagagaaggaaatg
aagtttcttgtcagaactttggttaggaacctgcgaattggagcaatgatgagaacagtt
cttcctgcattggctcaagcagttgctctgaacggttatgacgaagcaggaaaagttcca
aaggaattgcttcagggcctttctgctgctgctgttgaagtttataatattcttccggat
ttgaatttattggtaccttctcttatgagcgaaggcataaagttttccaccaccacgttg
actatggtaccaggcattcctatcaggcccatgcttgctaaaataactaatggaattgcg
caagcactgaagctattccagaataaagctttcacctgtgagtttaaatatgatggtcaa
cgcgcccaaattcacaaatttgatgatggttctgtgcgcatcttttcaagaaatggggat
gagatgactacaaaatttccagacttggtgcatattattcaggaatcatgtaaaacttcc
gctgaatctttcattattgatgcggaggtggttggaattgatcgcaacaaaggaatcaag
tttttatcctttcaagaactatctgccagagagagagggagcaaagcttccttggtttca
ttggatagaataaaggttgacatttgtgtccttgtgttcgatgtcatgttcgtcaatggg
gagaagctgttggctgtcccactccggcaaaggcggcagtgcatgaacgatctttttaaa
ggggaaaagcctggttttttggaatatgcaaaggaaacgactgtggaagcagacgaagct
cgtccagactgtgaagccactttgacaaagataaatgctttccttgaagatgcatttcag
tcttcttgtgaagggattatggttaagtcactggatgttgatgctggctactttgcttca
aaacgggctgattcatggttgaaggtaaagcgagattatatggacggtgtaggggactcc
cttgatttagttcccattggtgcttggcatggcaatgggagaaaggcaggatggtatagt
ccatttcttatggcttgttacaatcctgatacagaggaatatgaaagtttatgtcgtgta
atgacagggttttctgatgctttctacaaagagatgaaagatttactctccggagacaaa
atattgaccagaaagcccttgtattaccgaacagatgaagttccggatatgtggttttca
gctgaaatggtgtgggagataagaggtgcagacctcactgtatcacctgttcacaaggct
gcagttgcaatcgttcatccttcacgtggaatttctatgaggtttccgagatttgtccgc
tctctttcggacagacgaccagaagattgcagtacctctacggaagttgccgaaatgttt
cattctcagactcgaaagatggatttaagtggtgctcgttag
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