Spinacia oleracea (spinach): 130461566
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Entry
130461566 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC130461566
Organism
soe
Spinacia oleracea (spinach)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_1
Retrotrans_gag
rve
Integrase_H2C2
Asp_protease
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
130461566
NCBI-ProteinID:
XP_056685692
LinkDB
All DBs
Position
1:133385431..133392767
Genome browser
AA seq
1795 aa
AA seq
DB search
MQTRRAGSQSLIPIDLEIEATARKQGGRRRQNKNKKKDTMGDEAPAKSLWEYGIPDTTTG
VLSSIVRPAVTAAHFELKPQFIQFISNDSFSGSPNDCPVSHIDNFLEKCDTMKINNVTDE
AIRLRLFPFSLRDRAKEWLKDEGTGSFDTWDKLVKAFLVKFLDQEKTSRMRNELTTFRQA
EDESLYESWRRFKRLQRQCPHHGIPEWLLIQAFYNGLTHEYRIYIDAASGGSITAKVPSE
AKALIEKMAANDNYHPGGRNSAKKGGKYNVDALTMLTSTVQALSQKFDQFQTGSSTVASC
EVCGIQGHIANDCQINNAGLTIEQANALYNNNNQRRPFDPYSNTYNEGWKHNPAFSYKNT
QNRLNPPPPRNNFNQPPGFQARPPFNQQSFNQQAPPQPKSNLEAMVESLAASQLKQDKYW
EGQMKQNDFLATSIQQIQAQNKLMESQISQLAHQVGQFSKTPGQFPGNTEQPPKGQMNAV
TLRNGRVLEDLPPKEPQKKVIVVEEEKDESEKVVEEEKKEPIVSPIEPYKPPVPFPQRLA
QAKLEKKYGKFLEVLKKLHINIPFLDAISEMPSYAKFLKDMLSNKRKIEENATVSLTAEC
SAILQNKLPKKLGDPGSYSIPVKLGDIEIKKALCDLGASVSLMPLSICKKLNMGELKPTR
ISLQLADRTVKFPLGILEDVPLRVGKFFIPCDFVVMEMEEDAQVPIILGRPFLATAGAII
DMKNGKITFEVGDEKMEYTLTNSMGSPSMGETIYRVDALDEAIEAKAFSLQLDDSLQTVL
MGSADEEDWETREYKRLLEETRALASENPIKEVLKPREYKESSTPPEVELKPLPSNLKYV
FLGSNDTYPVIVNAELDDIQIEQLLTVLRKYKNVIGYTIDDIKGINPSFCMHKIILEDDH
ASSIEPQRRLNPNMRDVVRKEVVKLLDAGIIYPISDSKWVSPVQVVPKKGGMTVVKNDKG
EKIPTRTVTGWRMCIDYRRLNKATRKDHFPLPFIDQMLERLAKHSFFCWLDGYSGFFQIP
IHPNDQEKTTFTCPYGTYAYRRMPFGLCNAPATFQRCMMAIFSGLIENSMEVFMDDFSVY
GTSFDVCLDNLEKVLHRCQEVNLVLNWEKCHFMVQQGVVLGHVVSHRGIEVDRAKIEVIE
RLPPPNSVKGVRSFLGHAGFYRRFIKDFSKIARPLTELLCRDVPFVFTDACTEAFDRLKQ
ALISAPIIQSPDWNLPFEIMCDASDYAVGAVLGQRKDGKLHAIYYTSKTLAPAQMNYATT
EKELLAVVYAMEKFRSYLVGSKVIVHTDHAALKYLMSKKDAKPRLIRWILLLQEFDLEIR
DKKGAENVVADHLSRLVLEGESDEDLPIDDSFPDEKLLVIATTEIPWYADIANYLACGTI
PHGYSSQQKKKFFKEVRRHFWDDPFLYKSCADGVIRRCIPENEVPSIISHCHELPCGGHA
GTTKTSAKILQCGFHWPSLFKDVHQHVKSCDRCQRTGNISKRNEMPLNNILEVELFDVWG
IDFMGPFPSSYGNKYILVAVDYVSKWVEAIATPTNDARVVSKFFKKTIFPRFGIPRVLIS
DGGQHFLENRFEAMLKKYGVHHRVGLSYHPQTSGQVEISNREIKTILEKTVARTRKDWSA
KIDDALWAYRTAFKTPIGTTPYRLVYGKACHLPVELEHRAFWAIKALNFDSQAAGEKRLL
QLNELDELRLDAYESSRLYKEKTKRWHDKHILRREFKEGDLVLLFNSRLKLFPGKLRSRW
SGPFRVSKVFPYGSIELWNRQNGTFKVNGQRVKHYRVGDPIDESVDVTLSEPSPE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcgacgtgcaggctcacagagtttgattcctattgatcttgaaatcgaggcc
actgcacgcaagcaagggggtagaaggagacagaacaagaacaagaagaaggatacaatg
ggtgacgaagcaccagccaaatctctctgggaatatggtataccagatacaactactggt
gtactttctagtattgtcagaccagctgtcactgctgcacactttgaactgaagcctcaa
tttattcagttcatctccaatgattcattctcaggctcgcctaatgactgtcctgtaagt
catattgataactttctggagaagtgtgacactatgaagatcaacaatgtcactgatgag
gccattaggctacgacttttccctttttctctgcgggatagagccaaggagtggttgaaa
gatgaaggtacaggctcgtttgatacatgggataaattggtcaaggcattcttggtgaaa
tttctggaccaagagaagacttctagaatgagaaatgagttaaccacctttcgtcaagct
gaagatgagtcattgtatgagtcttggagaagatttaaacgtttgcaaaggcaatgtcct
catcacgggattccagagtggctcttaatccaagctttctataatgggttgacgcatgag
tatcggatctacattgatgctgcatcaggtggctctatcactgcaaaggttccatctgaa
gctaaggcattaattgagaaaatggcagctaatgacaactatcacccaggtggtcggaac
agtgctaaaaagggaggtaaatataatgttgatgctttaaccatgttgaccagtactgtg
caggcactatctcaaaagtttgatcaatttcaaactgggtcatctacggtagcttcatgt
gaagtatgtggaatacaaggacatattgctaatgattgtcaaatcaataatgctgggttg
acaattgaacaagccaatgctctttacaacaacaataaccagagacggccatttgatcct
tattccaatacatacaacgaggggtggaagcacaatcctgcattctcatacaagaacact
caaaatcggcttaatccaccaccaccgcgcaacaacttcaatcaacctccaggttttcaa
gctagaccacctttcaaccagcaatctttcaatcaacaggcccctccacaaccaaagtcc
aatttggaagctatggttgagtctcttgctgcctcacaacttaagcaagacaagtattgg
gaagggcagatgaagcaaaacgatttccttgctacctcaattcaacaaattcaagctcag
aacaagctcatggagagtcagataagtcaacttgctcaccaagtaggtcaattctcaaag
actccaggccaatttccgggaaatactgagcaaccgcctaagggccagatgaatgctgta
actttgaggaatggtagagtgttagaagaccttccaccaaaggaacctcaaaagaaagtg
attgtggtagaagaagagaaagatgaatctgaaaaagtggttgaagaagaaaaaaaggaa
ccgattgtttctcccattgagccatacaagccacctgttccttttccacagagactagca
caggctaagctagagaagaaatatgggaagttccttgaggtactgaagaagctgcacatc
aacatccctttcttggatgctatctcagagatgccttcttatgctaaattcttaaaagac
atgctctcaaataagaggaagattgaagagaatgcaactgtttcattgacagctgagtgt
agtgccattttgcagaacaagcttccaaagaagctaggagatccaggcagttattctatt
cctgtcaagcttggtgatattgagatcaagaaagcattatgtgatcttggggcaagtgtg
agtcttatgcccttgtcaatctgcaagaagcttaatatgggtgaactgaagcccacacgc
atctccctacaactggcggatagaacagttaagtttccccttggtatccttgaagatgtt
ccactccgagtaggaaaattcttcattccatgtgattttgttgtgatggaaatggaggaa
gatgcacaggttcccatcatacttggaagaccctttttggccactgctggagccataatt
gatatgaagaatgggaagatcacctttgaagtgggtgacgagaagatggagtatacactc
acaaactccatgggttctccttctatgggagaaactatctatagggtggatgctcttgat
gaggcgatagaagctaaggctttcagtttgcaacttgatgattcgctacagacagtcttg
atgggcagtgcagatgaagaggattgggaaactagggagtacaagaggctcttggaagag
acacgagctttagcatctgaaaatcctatcaaggaggtgttgaaaccgagagaatataag
gagagttccacgcctcctgaggtagagttgaaaccccttccctctaatttgaagtatgtt
ttcttgggttctaatgatacataccctgttattgttaatgctgaacttgatgacattcag
attgagcaattgcttactgttttgagaaaatataagaatgtcattgggtacaccattgat
gatattaaggggattaacccttcattttgcatgcataaaatcattcttgaggacgatcat
gcttcttctattgaacctcaaaggagacttaatcctaacatgagggatgtagtcaggaaa
gaagttgttaaattgcttgatgcaggtataatctaccctatctcagatagtaagtgggtt
agcccggtgcaagtagttccaaaaaaaggaggtatgaccgttgtcaagaatgataaaggt
gagaaaattcccactagaactgtgacagggtggcgcatgtgcattgattataggagattg
aataaagccacccgaaaagatcatttccccctcccatttattgatcagatgttagagagg
ttggcaaagcattcctttttctgttggttagatggatattcaggctttttccaaattcct
atccatcctaacgatcaggaaaagactactttcacatgcccttatggtacttatgcttat
cgtaggatgccatttggattatgtaatgctcctgccacctttcaaagatgcatgatggca
attttctcaggtcttattgagaactctatggaagtatttatggatgacttctctgtctat
ggaacatcttttgatgtttgtctagataatttggaaaaggtgctccatagatgtcaagaa
gtcaatctagttctcaattgggaaaagtgccatttcatggtacaacagggagtcgtttta
ggtcatgttgtttctcataggggcatcgaagttgatagagcaaagatagaggtcattgag
cgcttaccacctcccaactccgtaaaaggggtaaggagtttccttggtcatgcaggcttt
tatcgtcgttttatcaaggacttttcaaaaattgctcggcctctaaccgaactcttatgc
agagatgtcccctttgtttttactgatgcttgcactgaggcttttgacaggttaaagcaa
gctctcatatctgcccctatcattcagtcacctgactggaatcttccatttgagatcatg
tgtgatgccagtgactatgcagtgggggcagtgttgggccagaggaaggatggcaagcta
catgcaatctactatacgagcaagactcttgctccagcacaaatgaactatgccacaaca
gagaaagagttattagcagtggtgtatgctatggagaagtttcggtcctatctggttgga
tcgaaggtgatagttcacacggatcacgcagcactgaagtacttgatgagtaagaaagat
gctaagcctcgtttgattcgttggattttgctactccaagaatttgacttggaaattagg
gacaagaagggagccgaaaatgttgttgctgatcatctctcccgacttgtccttgagggt
gaaagtgacgaggatctccctattgacgattcatttcctgatgagaaactcctagttata
gctactacagagatcccatggtatgctgatatagccaattatctggcttgtggtactatt
cctcacggttattcatcacagcaaaagaaaaaattctttaaggaggtgagaagacatttc
tgggacgacccttttctttataagtcttgtgcagatggggtgattcgaaggtgcattcca
gaaaatgaggtaccatctattatttcacattgtcatgaattaccttgtggaggacatgct
ggtactactaagacttctgcgaagattctacagtgtggttttcattggccaagccttttc
aaagatgttcatcaacatgtcaagtcttgtgatcgttgtcaacgaactggtaacatctct
aagaggaatgaaatgcctcttaataatattctcgaggttgaactgtttgatgtgtgggga
attgattttatgggaccgttcccttcttcctatgggaacaagtatatcttggttgctgtg
gattatgtctcgaaatgggttgaagcgatagctactccaaccaacgatgctcgtgtggta
agcaagttctttaagaaaactatttttcctcgatttggcataccacgagtgttgattagt
gacggaggccagcatttcttggaaaatcggtttgaggcgatgcttaagaaatatggagta
catcatcgtgtggggttatcataccacccacaaactagtggtcaagtagaaatttctaac
cgggaaatcaaaaccatcttggaaaagacggttgcgagaacaaggaaagattggtctgcg
aaaattgatgatgcactttgggcgtacaggactgcttttaaaacacctattggtacgact
ccgtatagacttgtgtatggtaaggcttgtcatcttcctgttgagttggaacaccgtgcg
ttttgggctatcaaagctcttaattttgactctcaagcagcaggcgagaaaagactccta
caacttaatgagctagatgagcttcgactagatgcttatgaaagttcaaggttgtacaag
gagaaaacgaaaagatggcatgacaagcatattttgagaagagagtttaaggaaggcgac
ttagttctcctgtttaactctagattaaaactttttcctggcaaacttcgctctagatgg
tcgggaccgttccgagtcagtaaggttttcccttatggttcaatagagctctggaacaga
caaaatggaacttttaaggtgaacggtcaaagagtgaaacactacagagttggagaccct
attgacgagagtgttgacgtcacactttccgaaccttcaccggaatga
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integrated database retrieval system
