Serratia odorifera: NCTC11214_00036
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Entry
NCTC11214_00036 CDS
T06612
Symbol
traI_1
Name
(GenBank) Multifunctional conjugation protein TraI
Organism
sof
Serratia odorifera
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Gene cluster
GFIT
Motif
Pfam:
TrwC
TraI_C
AAA_30
TraI_2B
ssDNA_TraI_N
AAA_19
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VDZ51105
UniProt:
A0A447KJQ1
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All DBs
Position
1:complement(24739..30018)
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AA seq
1759 aa
AA seq
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MMSIGQVGPAGKAGDYYTHQDNYYVLGSMDERWVGEGAEALGLSGKVDVKDFVAVLEGKL
PDGSDLTRMVGNENKHRPGYDLTFSAPKSVSIMAMLGGDKRLIAAHNHAVEVAVREIEKM
ASTRVMTDGVSETKLTGNLVVALFNHDTSRDLDPQLHTHAVVANVTQHDGKWQTLSSDTV
GKTGFIESVYANQVAGGQIYRHILQREVEAMGYETEPTGPHGMWEFKSTEAVREPFSKRS
HAIDAAAGPDASLKSRDMATLDTRKAKVTPDQAELFVAWMQQMKSTGFDPKSYQAETQSR
TMVTPSPTPLEAGGDTLVDKAVEQAISALSDRQVNFTHNQVANKAISYLSGEPGMLDAVR
DGIDRAIEREQLIPLDKEKGVFTSDIHLLDELSVAQLSRTHIDESAVVIGAPRPDPRTGS
LPAYSDAVQTLAQHAPTMAVLSGIGGASVNRARVAEVVALAREQGRDATVLTVDRQSQQY
LQQSVHLDEGRVLTRAALDSEALFAPNSTLVVDQAEKLTLKETVTLLDGAVRNNVQLVLM
DTEKRKGTGNALSVMKEAGVPRYQFSGRQAVPAEVVSEPDKAQRFGQLAKGVVQALAEDR
PSVAQVNGPADQRMLTAMIRDELKETGLLGREETHVATLTPVWLDSKNRGAIDTYREGMV
MERWDADSKQRERFVIDRVGAQTRNLVLRSAAGEKQTLAVRELDKDWSLFRPGIIAVAEG
ERLRVLGQEGRGKDAMKAGTELTVLRAGAGELQVKVAGEPDATQKLGVRTLAVGSDAFSS
VKVAQAYVEGLGASVSSTSAVYAAVKKNELNSATLSGIARSGGHITLYSALDARKTQEKV
AQHPAYRLAGEQVKQLAGEEGLDAAIAGQKSSLFTPQQQAIHLAIPTLEGDNVAFAQAKL
LAGSLSFAAKGVSIDAIQTEIDAQVKRGELLKVDVAPGVGADLLVSRASFEAEKSIIRLI
ADGKDSMPALMSEAAKNQLASSQKSLTHGQKESVGLILSTTDRFVAIQGYAGVGKTTQFK
AVLAGIDQLPESERPRVVGLAPTHRAVGEMQAAGVDAQTLASFLHDEGMKVASGEKPDYR
NTLFVVDESSMVGNSDMARAYALIAEGNGRAVMSGDEAQLQPIAPGTPFRLAQGRSAIDM
AVMKEIVRQTPELKPAVYKIIDNDVPGALDVVRAVAPANVPRQANAWVPAQSVMELAVDI
ADIHEAIVSDYMGRTEAARRDTLIITHLNADRHIINAHIHGERKAAGELKGDAVSLPVLE
TANIRDGELRKLGTWARNRGAVVLLDNTYYRMAAIDSQSRTVSLQDSEGNTRQFSPSSAV
REGVTLYNPRTLEVSVGDRMRFSKSDVERGHVANSTWTVEAIKGDIVTLSDGHQTRTVNP
RLQQHDRHVDLAYAITAHGAQGASERYAITLEGVDGGREQMVNRASAYVALSRAKDHVQV
YTDDEAGWLKAIGKAKERTTAHDAVLGMAPGSQKAAADLYGKAVTLADNALGRAVLRGSN
LTGNTLAHYVSPGKKYPQPHAMLPMYDANGKPAGAWLAPLADMQGKSVGGLPTQGRVLGS
DNAQFVALQASQNNETRMAASMDAGIRLAAQHPDSGVVVRLQGEGVPFNPQAMTGGKIWV
NDDTLKATALGSLSSDSAIKLPETPEERQQRELQAQADKLGREPGAPDPQRLAGLNDEQL
RALLIRGELRAEDVKAHLPDAVVRDVLGQDAALQRDAAIRQVAREPASTRSRLQQDEQNL
VRDVHPERELSKEKTLGGD
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcattggccaggttggacccgccggcaaggccggtgactattacacccatcag
gacaactattacgtgctgggcagcatggatgagcgctgggtgggcgagggggccgaagcc
ctgggcctgagcggcaaggtggatgtgaaggatttcgtggccgtgctggaagggaagttg
ccggatggtagcgatttgacccgtatggtcggcaacgagaacaaacatcgccccggctat
gacctgacgttctcagcccccaaaagcgtctccatcatggcgatgctgggcggcgacaaa
cgtcttatcgccgcgcataaccatgcggtagaggtggcggtgcgtgagatagagaaaatg
gcctcgacgcgggtgatgaccgacggcgtttccgaaaccaagctgaccggcaacctggtg
gtggccctctttaaccatgatacctcgcgcgacctggacccgcagctgcacactcatgcg
gtggtggccaacgtcacgcagcatgacggtaagtggcagacactttccagcgatacagtc
ggcaagaccggctttatcgaaagtgtgtatgccaaccaggtggcgggcggccagatatac
cgccatatcctgcagcgtgaagtcgaagccatgggatacgagacggagcctaccggtccg
catggcatgtgggagttcaaaagcacggaggcggtgagggagccgttctccaaacgcagc
cacgccatcgatgccgccgccggccctgatgcttcgctcaagtcgcgcgacatggcgacg
ctcgatacccgcaaggctaaggtaacacctgaccaggccgagttgtttgtcgcctggatg
cagcaaatgaaatccaccggttttgaccctaaatcgtatcaggctgagacgcagtctcgc
acgatggtcacgccctccccgaccccgctggaagcggggggcgatacccttgtcgacaag
gccgtggagcaagccatttcggcgctctctgaccgtcaggtcaacttcacccacaaccag
gtggccaacaaggcgatcagctatctctccggtgagccaggcatgttggacgcggtgcgt
gacggtatcgaccgcgccatcgagcgtgagcagcttatcccgctcgacaaggagaagggc
gtgttcacctccgatattcatctgctcgatgaactgagcgtggcgcagctgagccgcacc
catattgacgagagcgcggtggtgattggcgcaccgcgacccgacccgcgcaccggcagc
ctgccggcctacagcgatgccgtgcagacgcttgcgcaacacgcgccgacgatggcggtg
ttgtcggggatagggggcgcatcggttaaccgcgcccgcgtggcggaagtggtggcgctt
gcgcgcgagcagggccgcgacgccaccgtgctgaccgttgaccggcagtcacagcagtat
ctgcagcaaagcgtccatctcgatgaaggtcgtgtgttgacgcgcgctgcgcttgacagt
gaggcgctgttcgcaccgaacagcacgctggttgttgaccaggcggaaaaattgacgctg
aaagagaccgtcaccctgctggatggcgcggtgcgtaacaacgtccagctggtgctgatg
gataccgaaaagcgcaaggggaccggtaatgcgctctccgtcatgaaagaggccggtgta
ccgcgctatcagttcagcggtcgccaggcggtgccggcagaggtggtgagtgaacctgac
aaggcgcagcgctttggccaactggcaaaaggggttgtgcaggcgctggccgaggaccgt
ccgtcggttgcgcaggtaaacggcccggccgaccagcggatgctgacggcgatgatccga
gatgagttaaaagaaaccgggttgctggggcgtgaagagacccacgtggccacgctgaca
ccggtgtggctggacagcaaaaatcggggcgccatcgatacctaccgggaaggcatggtg
atggagcgctgggatgcagacagcaagcagcgcgaacggttcgtcattgaccgtgtgggt
gcgcagacccgtaacctggtcttgaggtcggctgccggtgaaaaacagacattggcggtg
cgggagctggacaaggactggtcactgtttcgccccggcatcatagcggtcgccgaaggc
gagcggctacgtgtgttaggccaggaggggcgcggcaaggacgcgatgaaagccggcacc
gagttgacggtattgcgtgccggcgccggtgaactgcaggtgaaagtggcgggcgagccg
gatgcgacgcagaagctgggggtccggacgctcgcggttggcagcgacgctttcagctcc
gtcaaagttgcgcaggcgtatgtggaaggcctcggcgcatcggtgagcagtacatcggcg
gtctatgccgccgtgaagaaaaacgagcttaacagcgccacgctgagtggtatcgcccgc
agcggcgggcacatcaccctctattcagccctcgatgcgcgcaagacgcaggagaaagtt
gcccaacacccggcgtaccgcctggcgggtgagcaggtcaaacaactggccggtgaagag
ggacttgatgccgcgatcgccgggcagaaatcatcactgtttaccccgcagcagcaggcc
attcatttggccattccgacgctggaaggggataacgtcgcgtttgcccaggccaaactg
ctggccggcagcctgagcttcgcggccaaaggcgtgtcgatagacgctattcagacggaa
atcgatgcgcaggtcaaacgtggtgagttgctgaaagtggatgtggcacccggcgtcggg
gcggatttgctggtatcgcgtgccagcttcgaggcggagaaaagcattatccggctgatc
gccgacggcaaagacagtatgccggcgctgatgagcgaagcggcgaaaaatcaactggcg
tcaagtcagaagtcgctcacgcatgggcagaaagagagtgtcggccttattctcagcacg
accgaccggtttgtggccatccagggctatgccggcgtcggtaaaaccacccagttcaaa
gccgttctggcagggatagaccagttacctgaaagcgaacggccacgcgtggtcgggctg
gcgccgacgcaccgcgcggtgggggaaatgcaggccgccggcgtcgacgcccaaaccctg
gcgtcgttcctgcacgatgaaggaatgaaagtcgccagcggcgagaaaccggactaccgc
aacacgctgtttgtggtggacgagagttcgatggtcggcaacagcgatatggcgcgcgcc
tacgcgctgattgccgagggcaacggccgcgcggtcatgagcggtgacgaagcgcagctg
cagcccatcgcgccggggacaccgttccggttagcacagggacgcagcgctatcgatatg
gcggttatgaaagagattgtgcgccagacccccgagctgaagccagcggtgtacaagata
attgataacgatgtgcccggcgcgctggacgtggtacgcgcggtggcgccggccaacgtg
ccccggcaagccaatgcctgggtgccggcccagtcggtgatggaacttgcggtagatatt
gcagatattcatgaagcgattgtcagcgattatatgggccgtacagaggctgcccgacgg
gatacgctgatcatcacccacctcaatgccgatcggcacatcatcaatgcccacattcac
ggcgaacgtaaagcagcgggtgagctgaagggcgatgccgtctctttgcctgttctggaa
accgccaacatccgcgatggcgaactgcgcaagctgggcacctgggcgcgtaaccggggc
gccgtcgtcctgctggataacacctactaccggatggccgctatcgacagtcaatcacgt
actgtcagcctgcaggacagtgaaggtaatacccggcagttttccccgtccagtgcggtg
cgtgaaggggtgacgctgtacaaccctcgcaccctcgaggtgagtgtgggcgaccgcatg
cgcttttccaagtcggacgtcgagcgcgggcatgtggccaacagcacctggacggttgag
gcaataaaaggtgacatcgtcacactcagcgacggtcatcaaactcgcaccgttaatccc
cgcctgcagcaacacgaccggcacgtcgatttggcctatgccatcaccgcgcacggcgcg
cagggggcgagtgagcgctatgccatcacgctggaaggcgtagacggcggccgcgaacag
atggtgaaccgggcctcggcgtatgtggcgctgtcgcgcgccaaggatcatgtgcaggtg
tacaccgatgacgaggccgggtggctgaaagccatcggcaaagcgaaggagcgcaccacc
gcgcacgatgcagtgctgggaatggcgcctggcagccaaaaggcggccgccgacctctac
ggcaaggcggtcacgcttgccgataacgcgctgggacgtgcggttttgcgcggcagcaac
cttaccggtaatacgctggcgcactatgtgtctccgggcaagaaatacccgcaaccgcat
gcgatgttgccgatgtatgacgccaacggcaaaccggccggtgcctggctggcgccgctg
gcagacatgcaggggaaaagcgtgggcggattgccgacgcaggggcgtgtgctcggcagt
gacaacgcgcagtttgtggcgctgcaggcaagccaaaacaatgaaacccgcatggcggcg
tcaatggacgccggcattcggctggcggctcaacatcctgacagtggcgtggtggttcgc
ctgcagggcgagggcgtcccctttaatccccaggcgatgaccggcggaaaaatatgggtg
aatgatgacaccctcaaggccaccgcgttggggagtctatcgtccgacagtgccatcaaa
ctgccggagaccccggaagagcggcaacaacgtgagctgcaggcacaggccgacaaactc
ggccgcgagccgggtgcccccgacccgcagcggctggccgggcttaatgatgagcagctg
cgtgcactgctcatccgcggcgaactgcgggcggaagacgtgaaagcgcacctgccggac
gcggtggtgcgggacgtgctgggccaggacgcggccttgcaacgcgatgcggccatccgg
caggtggcgcgcgaaccggcatcgacccgtagccggctgcagcaggacgaacagaatctg
gtgcgcgatgtgcatccggagcgggaacttagcaaagagaaaaccctgggcggcgactga
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