KEGG   Serratia odorifera: NCTC11214_02609
Entry
NCTC11214_02609   CDS       T06612                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sof  Serratia odorifera
Pathway
sof00010  Glycolysis / Gluconeogenesis
sof00020  Citrate cycle (TCA cycle)
sof00260  Glycine, serine and threonine metabolism
sof00280  Valine, leucine and isoleucine degradation
sof00310  Lysine degradation
sof00380  Tryptophan metabolism
sof00620  Pyruvate metabolism
sof00630  Glyoxylate and dicarboxylate metabolism
sof00640  Propanoate metabolism
sof00785  Lipoic acid metabolism
sof01100  Metabolic pathways
sof01110  Biosynthesis of secondary metabolites
sof01120  Microbial metabolism in diverse environments
sof01200  Carbon metabolism
sof01210  2-Oxocarboxylic acid metabolism
sof01240  Biosynthesis of cofactors
Module
sof_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sof_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sof_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sof_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NCTC11214_02609 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NCTC11214_02609 (lpdA)
   00620 Pyruvate metabolism
    NCTC11214_02609 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NCTC11214_02609 (lpdA)
   00640 Propanoate metabolism
    NCTC11214_02609 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NCTC11214_02609 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NCTC11214_02609 (lpdA)
   00310 Lysine degradation
    NCTC11214_02609 (lpdA)
   00380 Tryptophan metabolism
    NCTC11214_02609 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NCTC11214_02609 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sof04147]
    NCTC11214_02609 (lpdA)
Enzymes [BR:sof01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NCTC11214_02609 (lpdA)
Exosome [BR:sof04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NCTC11214_02609 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: VDZ57922
UniProt: A0A447KRY9
LinkDB
Position
1:2403149..2404573
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGATTINFDNAIIAAGSRPIQLPFIPHDDPRVWDSTDALELKNVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEQGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggatactct
gctgcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccacg
ctgggcggggtttgcctgaacgtggggtgtatcccttccaaagcgctgctgcacgtagcc
aaagtgatcgaagaagccaaagcgctggctgaacacggcatcgttttcggtgagccgaaa
accgatatcgacaagatccgcacctggaaagaaaaagtcatcaatcagctgaccggcggt
ctggctggcatggctaaaggtcgtaaagtcaaagtggttaacggcctgggtaaattcacc
ggcgctaacaccctggttgttgaaggcgaaaacggtgctaccaccatcaacttcgataac
gccatcatcgctgcaggttctcgtccgatccaactgccattcattcctcatgacgatccg
cgcgtgtgggattccaccgatgcgctggagctgaaaaacgtgcctgagcgtctgctggtt
atgggcggcggcatcatcggtctggaaatgggcaccgtatatcacgcgctgggttcgcag
atcgacgtggttgaaatgttcgatcaggttatcccggcggccgataaagacgtggtgaaa
gtgttcaccaaacgcatcagcaagcagttcaacctgatgctggaaaccaaagtcactgcg
gtagaagccaaagaagacggcatctacgtgacgatggaaggcaagaaagcgccggcggaa
ccacagcgttacgacgcggtgctggtggctatcggccgtgtgccgaatggcaaactgctg
gatgccggcaaagccggtgtggaagtcgacgaccgtgggttcatccgcgttgacaagcag
ctgcgcaccaatgtgccgcacatcttcgctatcggcgacatcgtcggtcagccgatgctg
gcgcacaaaggcgtgcatgaaggtcacgttgccgcggaagtcatctccggcaagaaacac
tacttcgatccgaaagtgatcccttccattgcttacaccgagccggaagttgcctgggtt
ggtctgaccgagaaagaagcgaaagagcagggcatcagctacgaaacgtccaccttcccg
tgggctgcgtctggccgtgctatcgcatccgactgtgccgacggcatgaccaaactgatc
ttcgacaaagaaacccaccgtatcatcggcggcgcgattgtcggcaccaacggcggcgag
ctgctgggtgaaatcggtctggccatcgaaatgggttgtgacgcggaagacatcgcgctg
accatccacgcccacccgacgctgcacgagtctgtaggcctggcggcggagattttcgaa
ggcagcatcactgacctgccaaacccgaaagccaagaaaaagtaa

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