Shewanella oncorhynchi: RA178_03160
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Entry
RA178_03160 CDS
T09381
Name
(GenBank) LysR family transcriptional regulator
Organism
sog
Shewanella oncorhynchi
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_20
HTH_30
HTH_24
SnoaL
MarR_2
Crinivirus_P26
R_equi_Vir
HTH_8
Motif
Other DBs
NCBI-ProteinID:
WMB75185
UniProt:
A0AA50KHG7
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Position
700341..701330
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AA seq
329 aa
AA seq
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MKTEDLALFHRIAETGSLIEAADLLNLPKSTVSRRLQALEDELNIKLFHRQSRSMTLTSA
GSHFYQRSQNILAQLDETLFEMTNDDAEISGHLRIQMFPIHSMKILMQAIFRFMDMHPKL
TLEVISSSESVDMVKHNLDVAFVVEPALDTLDLVVRPIFTTDLRFYASPQYLAAHGTPKT
PKEIEAHNVSMFRLSNGKIFNELFIGSEQEVRVRGNFCSNSIEVAVEFGLQGRGIVYAPA
EVVDEYVQSGELVTLLPEIQPHQGECFLAYPSRRYVSLACRRFIDYIMQELVPNGVPINM
SEQGPRRSCKASTGAFSDDVLRFPVKKSS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaggacttagcgttattccaccgaattgctgaaaccggtagtttgattgaa
gcggcggatttacttaacttacctaaatcgactgtgagtcggcgtttgcaagccttggaa
gatgagctgaacattaaattgttccaccgtcagagccgctctatgacgctcacttctgcg
ggcagtcatttttaccagcgctcgcagaatattttggctcagctcgacgaaaccctattc
gaaatgaccaatgacgatgctgagatcagcgggcatttgcgcattcaaatgttccccatc
cacagcatgaaaatcttgatgcaggccattttccgctttatggatatgcaccctaaactc
accttagaagtcatcagcagttcagaatccgttgatatggtgaaacataatctcgatgtg
gcctttgtggtcgagcctgcgttggataccttagatttagtagtgcggccgatttttact
actgacttacgtttttacgcgagccctcaatatttagcggcacacggtacacctaaaaca
ccgaaagagattgaagcacataatgtgtctatgttccgtttatccaacggcaaaatcttt
aatgagttatttatcggttcagaacaagaggtgagagtcagaggtaatttctgctccaat
agtattgaagtggcggttgagtttggattgcaaggacgcggcatagtgtatgcgcctgct
gaagtcgtggatgaatatgtacaaagcggtgagttagtgactttgttacctgaaatccaa
ccccaccaaggcgagtgtttcttagcttatccatcaagacgttacgtgagtttagcctgt
cgacgctttatcgactatatcatgcaagagctagtgccaaatggcgtgccgatcaacatg
agcgagcaaggcccacgtcgatcgtgcaaagcctctacgggagcgttttcagacgacgtg
ttgcgctttcccgttaaaaaatcaagctag
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