Shewanella oncorhynchi: RA178_18970
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Entry
RA178_18970 CDS
T09381
Symbol
sspA
Name
(GenBank) stringent starvation protein SspA
KO
K03599
stringent starvation protein A
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sog03021
]
RA178_18970 (sspA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_18970 (sspA)
Transcription machinery [BR:
sog03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RA178_18970 (sspA)
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_18970 (sspA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GST_N
GST_N_2
GST_N_3
GST_C
GST_C_2
Glutaredoxin
TGT_C1
Motif
Other DBs
NCBI-ProteinID:
WMB72477
UniProt:
A0AA50KCG4
LinkDB
All DBs
Position
complement(4275973..4276602)
Genome browser
AA seq
209 aa
AA seq
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MAVAANKRSIMTLFSGADDLYSHQVRIVLAEKGVTVDVLQVDPNEMPEDLLEVNPYNSVP
TLVDRELVLYESRIIMEYLDERFPHPPLMPVYPVSRGQSRLMMHRIDTDWYSLVDRIRKG
DRVEAARKELTESLIAIAPIFGEVPYFMSEEFGLADCYLGPLLWRLPVLGIELDSRVAKD
IKAYMTRIFERESFKASLTEAEREMRMGM
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgctgccaacaaacgctctatcatgacactgttttcaggtgctgatgatctg
tatagccatcaagtacgtatcgtgttagctgagaaaggggttactgttgatgttttacag
gtcgaccctaacgaaatgcctgaggatttgctcgaagtaaatccatataactcagtgcca
actttggtagaccgtgaactcgttttatacgaatcacgcattatcatggaatatttggat
gagcgttttcctcatccgcctttgatgccagtttatccagtgtctcgcggccaaagccgt
ttgatgatgcatcgcatcgatacagactggtattcgctcgttgaccgtatccgtaaaggt
gatcgtgttgaagcggctcgtaaagagttgactgaaagcctgatcgcaattgcgcctatc
ttcggtgaagtgccttacttcatgagcgaagaatttggtctagcggattgctaccttggc
ccattgttgtggcgcttacctgtattaggtattgagctagatagccgtgtagctaaagat
atcaaagcgtatatgacacgtatttttgagcgtgaatcgtttaaagcttctttaactgaa
gccgaacgcgaaatgcgcatgggtatgtaa
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