Schizosaccharomyces osmophilus (fission yeast): SOMG_03943
Help
Entry
SOMG_03943 CDS
T09274
Symbol
snf21
Name
(RefSeq) RSC-type complex ATPase Snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_03943 (snf21)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_03943 (snf21)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
SOMG_03943 (snf21)
RSC complex
SOMG_03943 (snf21)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
SOMG_03943 (snf21)
SWI/SNF complex
SOMG_03943 (snf21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Bromodomain
ResIII
SnAC
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
80877419
NCBI-ProteinID:
XP_056038204
LinkDB
All DBs
Position
2:complement(3191528..3195142)
Genome browser
AA seq
1204 aa
AA seq
DB search
MTFVEKEYSKSDTEELLEKWKKLKETGATERNNVAYAQICDELRNVQKNIQAKKKAKALL
KEYASSIDEEVEKKILKEMVKSYRQLSLNLPVSGNEVFRVLLDEERKTKQEDRNDLEVSE
VQTNLSPMSKNDFSFVEPEYLQPLSYRHRVQAHNQKLQDMAIHVRLTKRIHELEGMSAAT
EDIPSLHYFDGDQKPQHVHSTKRNALMELKMLRLAKRQEDLHAQIRHCKPYMRVLLNTAD
RVACKLPKPAPQATRLTEALERQQRSDRERRQKQRQYDYLQNICSRGRELAVRTKNAQAR
AQKSNRAVLAYHSHIEKEEQRRAERNAKERLQALREDDEEAYLKLIDQAKDTRITHLLRQ
TDTYLDSLASAVKDQQSQSGGAAYDDSLAGESEKKVDYYNVAHNIQEVIFEQPSILVGGK
LKEYQVRGLQWMISLYNNHLNGILADEMGLGKTIQTISLVTHLIEKKRQNGPFLIIVPLS
TLTNWAMEFERWAPSISKIVYKGPPLVRKALQPQVRHGNFQVLLTTFEYIIKDRPVLSRI
KWIYMIMDEGHRLKNTQSKLTNTLMTYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIF
KSVKSFDEWFNTPFANTGNQDKIELTEEESLLVIRRLHKVLRPFLLRRLKKDVESELPDK
VEKVIRCQMSGLQQKLYHQMKKHGILFVEDENKGRAGIKGLQNTVMQLKKICNHPYVFED
VERSIDPTGLNYDMLWRVSGKFELLDRVLPKLFRAGHRVLMFFQMTQIMNIMEDYLQYRH
FRYLRLDGSTKADDRSKLLGVFNDPTAEIQIFLLSTRAGGLGLNLQSADTVVIFDSDWNP
HQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILSRAQYKLDIDGKVIQAGKFDNKSTP
EERDAFLRSLLENENGEEHNDEKGELDDDELNEVLARSDQELDLYRKMTEEDDEISPYSK
SKGRERLIQVEELPEFYQQEQPAKVEEEPQILEDLGRGARRRVPVVYDETARDAQWLTEM
EMEPEVKPGRGRPKRSSSAVDEPVQLGLNGKPKRKRGPAPDTLTSEHRSLLRRVCLEIYN
TVYELKDEHDRLVNGMFLEVPSKKLYPDYYSIIKAPIALDIIRKHINGTYYKSLDAMISD
FMTMFNNARTYNEEGSFVYEDANYMQAAMEQKIQEFEENGTLATLRGMDLEAISQQEDRI
ENEA
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgttgagaaggagtatagtaagagtgatacagaagaactgttagagaaatgg
aaaaaattaaaagaaacaggcgcgacggaacggaacaatgtcgcgtacgctcaaatctgt
gatgaattaaggaacgtgcaaaaaaacattcaagctaaaaaaaaggcaaaagccttatta
aaagaatatgcaagttctatcgacgaggaagtggaaaagaaaattttgaaggagatggtg
aaatcatatcgtcagttgtcattgaatttgcctgtgtcgggcaatgaagtgttcagagta
ttattagacgaagaaagaaaaacgaaacaagaagaccggaatgatttggaagtgtcggag
gtgcagacgaatctgtcgccaatgtccaaaaacgatttcagttttgtggaaccggaatac
ctacagccattatcctatcgacacagagtccaggcacacaatcagaaattacaggacatg
gctattcatgttcgtttaacgaaacgaatacatgaattagaaggcatgtctgcggcaact
gaagatatacctagtttacattactttgacggagaccaaaagcctcagcacgtacactct
acaaaaaggaatgctttgatggaactaaaaatgctgcggctcgcaaagcgacaagaggat
ttacatgcacaaatccgacattgtaaaccatatatgcgcgttcttttgaatacagctgat
cgcgtcgcttgcaagcttcctaaacctgctccccaagctacacgccttaccgaggccttg
gaacggcaacaacgtagtgaccgggaacgccgacagaaacaacgccaatacgattatctg
caaaatatttgttctcgtgggcgggaactcgccgttcgcaccaaaaatgctcaggctagg
gcccagaaatcgaatcgcgctgttttggcatatcattcacatattgaaaaagaagaacaa
aggcgtgctgaacgcaacgcaaaagagagattacaggctttacgagaagatgatgaggaa
gcttacttaaaattaattgaccaggctaaggataccagaattactcatcttcttcggcaa
accgatacctatttggattctttggcatccgctgtcaaggaccagcagtctcaatcgggt
ggcgctgcttatgatgattctctcgccggcgaaagcgagaagaaggttgattattataac
gttgctcacaacattcaagaggttatttttgaacaaccatctattttagtcggtggtaaa
ctgaaagagtaccaagttcgcggtcttcagtggatgatatccttgtacaataaccatttg
aacggtattttggctgatgaaatgggtctgggtaaaaccattcaaactatctctttagtc
actcatttaattgagaagaagcgtcagaatggccctttcctgatcatcgttcctttatct
acactaacgaattgggctatggaatttgagaggtgggctccgtcaatctcaaaaatcgtc
tacaagggtccacctttggttcgtaaggctttacagccacaagtccgtcacgggaatttc
caagttttattaactacttttgaatatatcattaaagatagacccgttcttagtcgtata
aaatggatttacatgattatggacgaaggtcatcgattgaaaaatacccagtcaaaattg
actaacacattaatgacctactattcttctcgatatcgcctgattttgacgggaacacca
cttcaaaataatctgcctgagctgtgggcgttgcttaattttgtgcttcccaaaattttc
aagtctgtcaagagttttgatgagtggtttaatactccgttcgctaatactgggaatcaa
gataaaatagagctaaccgaagaagagtctttactggtgattagacgtttacacaaagtg
ttgcgtccatttttgcttcgtcgcttgaaaaaggacgttgaatccgagcttccagataaa
gttgagaaggtaatccgctgtcagatgtctggattacagcagaaattgtatcaccaaatg
aagaagcatggtattctgtttgttgaggatgagaataaaggtagagcaggtattaagggt
cttcaaaacactgtgatgcagttaaagaaaatttgcaatcatccttacgtttttgaagat
gttgaacggtcgattgatcccactggcctaaactatgatatgttatggagggtctctggt
aaattcgagttattagatagagtccttcctaaactgttccgtgcgggccaccgagtcctt
atgtttttccaaatgacacaaattatgaacatcatggaagattacttacagtaccggcat
ttccgttacttacgtttggatggttcgacaaaagctgatgatcgatctaagctactcggt
gtgttcaacgatcctacggcagaaatccaaatttttttactgagtactcgagcaggtggt
ttaggattgaatcttcagagtgctgatacagtcgtcatttttgattcagactggaatcct
caccaagatttacaagcacaagatcgtgctcaccgcattggtcaaacgaaggaagttaga
atttacaggcttatcacagaaaaatctgtggaagagaacattctttctcgggcccaatac
aaattagacattgacggaaaggttattcaagctggtaaatttgacaacaaatctacgcca
gaggaaagagacgcatttttgcgatctctattggaaaatgaaaatggtgaggaacataat
gatgagaagggagaactggacgacgatgaactaaatgaagtgcttgcgcgtagtgatcaa
gagctggacttgtatagaaagatgacagaggaggatgatgaaattagtccttatagtaaa
agcaagggcagagagcgacttatccaggtggaggaacttccggaattttatcaacaagaa
cagccggccaaagttgaagaggagccacaaattctcgaagatttgggacgtggtgctcga
cgtcgtgttcctgtggtgtacgacgaaactgctagagatgctcagtggcttaccgagatg
gaaatggagccagaagttaagccaggtcggggcaggcccaagcggagctcaagtgcagtt
gacgaacctgttcagcttggattaaacgggaagccaaagcgcaagcgaggccctgcacct
gatacattgacttctgagcatagatctcttcttcgtcgtgtttgtcttgaaatttataat
accgtttatgagttgaaagatgaacatgacagacttgtaaatggcatgtttttagaagtt
cctagtaagaagctctatccggactattactcaattattaaagcacctatcgctcttgat
atcatacgaaagcatattaacggaacttattataaatcgttagatgcaatgatttctgac
tttatgactatgtttaataatgctcgtacatataatgaggaaggttctttcgtgtatgaa
gatgccaattatatgcaagctgctatggagcagaagattcaggaatttgaggagaacggc
acgcttgcaactttacgtggaatggatttagaggcaatttcacagcaagaagaccgaata
gaaaatgaagcatag
DBGET
integrated database retrieval system
