Schizosaccharomyces osmophilus (fission yeast): SOMG_04892
Help
Entry
SOMG_04892 CDS
T09274
Name
(RefSeq) shuttle craft like transcriptional repressor/ubiquitin-protein ligase E3
KO
K12236
transcriptional repressor NF-X1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
som03000
]
SOMG_04892
04121 Ubiquitin system [BR:
som04121
]
SOMG_04892
Transcription factors [BR:
som03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
SOMG_04892
Ubiquitin system [BR:
som04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
SOMG_04892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
WDCP
MMU163
Motif
Other DBs
NCBI-GeneID:
80878357
NCBI-ProteinID:
XP_056039717
LinkDB
All DBs
Position
3:1905592..1908876
Genome browser
AA seq
1094 aa
AA seq
DB search
METSKNSPEAHTVKKGGRKFPRKNRNSSTQLSSSKQNGVNTEHSKTTSATIDGEPSGSKR
ASSAASLSADAPSFVPGMGLLTESSFGNRSNETNEKPSNSEKAEPNSKKNRNRNRKRPSS
TKKVDGVSTEQFNDTASSKRNGREHNRKPSNANAEKQNETNKPKEEPKASKGKKREGSKK
PKESIDLSKLDMTSRMIFEIKKMLYECSVCTDIVKTSTPVWTCSTCFHAFHLKCTRKWMK
NSIEQRNEPVWRCPSCQTPQKETSLQYTCWCGKQDEPESVKGLTPHSCGEPCGRTRGQDC
VHPCPLLCHPGPCPPCTATVEQFCLCGKESKITRCSGKSRAPQESFRCENICGEVLPCSK
HTCKQRCHSGLCGACYEPIRASCYCGAHSKTYTCSVLPDPISCVRLVDGTVAEYNGYYSC
GSFCEQYFDCGIHRCSKVCHPRSKTLEQCPLSPSIVAKCFCGKKNISDLLNGSERNSCED
SIPTCGNICLKQLPCGHQCKQNCHPGSCGSCQEVVTVPCRCKFNSVQVSCEELQKGYIPT
CERLCSVLLSCGRHECNKKCCSGYPKAQARLALRPKGALLRYHLLSEEFEEEHICLRPCN
KKLGCGNHSCNHMCHRGPCPRCLEASFEELTCTCGRTKLYPPIPCGTPIPSCPYLCTLPK
SCGHPQVKHNCHPPSEPCPFCPYLVKKNCLCGKHLMENQPCSKENVRCGTVCGKLLGCGI
HKCEKTCHREGECESVCRKPCGKRRLYCEHTCELPCHSEIPCDQKVSCKAMVAAVCSCGL
IKTQVSCGASFENPSPEHKISCTVDCAREERKRVLADALNINPDRKGKEVSQYTKSLLIY
YRDNREFGREIETALCDLCESEKPSVSFPPMQREQRWFIHTLAKLYGAESESFDSEPKRN
VVVYNKGMVKTPGVFLKEALDYYSQHPTMLLQSDSAFSNAPSSNASKTVGAGQEEIFESS
YDSEYNALFITDFRKEGEISEEEIRNALADIGDFESITWSIFRVENGIVMKPLGIEDIAG
ISSRLIALRALVNPRMLTANIADRCDVCQVNEENVVSKIRMPRIRSKKKAFLKLAPSQSL
SAVNPFETLERDIN
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatctaagaattcccctgaagctcatactgtaaagaagggtggtcgaaaattt
cctagaaagaatagaaattcatcgactcaattgtcatcttctaaacaaaatggtgtgaat
accgagcattcgaaaaccacttctgctaccatagacggtgagccttcaggttcaaagagg
gcgtcttcagcagcctctctatcagccgatgcccctagttttgttccaggcatgggcttg
ttaacggaatcttcatttggaaaccgttctaacgaaacaaacgaaaaaccctcgaattca
gaaaaagcggaaccaaattccaaaaagaacaggaatagaaacagaaaaaggccttcttca
acaaagaaggttgacggcgtttctactgaacaatttaatgatactgcgtcttccaaaagg
aatggaagagagcataacaggaaaccgagtaatgccaacgctgaaaagcaaaatgagaca
aacaagcccaaagaagaaccaaaggcttctaaagggaaaaagagagaaggatctaaaaag
ccaaaggagagcattgatctttctaagcttgacatgacttcgagaatgattttcgagata
aaaaaaatgctttacgaatgtagtgtttgtactgacattgtgaaaacaagcacccctgtt
tggacctgttcgacttgttttcacgctttccatttgaaatgtactagaaaatggatgaaa
aattctattgagcaaaggaacgagccggtctggcgttgtccttcttgtcaaactccacaa
aaagaaacgtctctgcagtacacttgttggtgcggtaaacaagatgaacctgagtctgtt
aaagggttgacacctcattcttgtggcgagccttgtggtaggactcgaggtcaggattgt
gtacacccatgtccattactttgccatcctggtccttgtccaccttgtacggctactgtt
gaacagttttgcctttgtggtaaggaaagcaaaataactcgttgctcaggaaagtccaga
gctccccaagaatctttcagatgcgaaaatatatgtggtgaagttttgccatgcagtaag
catacctgtaaacaacgttgtcattcaggtttatgtggtgcatgctatgaacctattcgt
gcaagctgctattgtggtgctcattcaaaaacatatacatgctctgtcttaccagatccc
atttcatgtgtaagacttgtggatggcacagtcgccgaatataatggttattatagctgc
ggcagtttttgtgagcagtacttcgattgcggaattcataggtgctcgaaggtttgtcat
cctcgatcaaaaactcttgaacagtgtcctttatccccgagtatcgtagcaaaatgcttt
tgtggaaaaaagaatatttccgacctgctgaatggcagcgagcgtaattcatgcgaggat
tctattcctacttgtggaaatatttgtttgaaacaactgccttgcgggcatcaatgtaaa
cagaattgtcatccaggttcttgtggatcttgtcaagaagttgtcaccgttccatgcagg
tgcaagttcaattccgtgcaggtttcttgtgaggaacttcaaaagggatatataccaacg
tgtgaacgactttgtagcgtattacttagttgtgggcgacatgaatgtaacaaaaagtgt
tgtagtggttatcctaaggcacaagctcgtctggctttacgtccaaaaggtgctttgctt
cgttatcatttactttctgaagaatttgaagaagaacatatatgcttacgtccttgcaac
aagaagttgggttgtggtaatcattcctgcaatcatatgtgccatcgtggcccttgtcct
cgatgcttggaagcttcttttgaagaacttacttgcacttgtggacgtacgaaattgtat
ccccccatcccttgcggtacacctattcctagctgtccttatctttgtaccttaccgaaa
tcctgtggacatcctcaggtaaaacacaattgccatccaccttcggagccttgtcccttt
tgtccgtatcttgtgaaaaagaactgtctttgtggcaaacatctgatggaaaatcaaccc
tgctcgaaggaaaatgttcgctgcggaacggtttgtggaaagctgttaggttgcggaatt
cacaagtgtgagaaaacatgccatcgcgagggagaatgcgaaagtgtttgcagaaaacct
tgtggaaagcgtagattgtattgtgagcatacttgtgaattaccttgtcattccgaaatc
ccatgcgatcagaaagtgtcatgtaaagcaatggtggctgctgtgtgttcatgtggatta
attaagactcaggtatcttgtggtgcaagttttgaaaatccttctcctgagcataaaata
tcttgtacagtagactgcgcaagagaagagcgtaaacgtgttttagcagatgcgttgaat
attaaccctgatcgaaaaggcaaagaggtttcacaatatacgaagagtttattgatttat
tatcgagataacagagaatttggtcgggaaattgagacagctctttgtgatctatgtgaa
agcgaaaagcccagtgttagctttcccccaatgcaacgtgaacaacgatggttcattcat
actttagcaaagttatatggagcagaaagcgaatcatttgattctgaacctaaacgcaat
gttgttgtttataataaaggtatggtaaagaccccgggcgtgtttttgaaggaagccttg
gattattattcgcagcatccaacgatgttattacaaagcgacagtgcttttagtaatgcg
ccgtcttcaaatgcgagcaaaacagttggggcgggtcaggaagaaatctttgagtcatct
tatgattcggaatacaacgctctttttatcacagatttccgaaaggaaggtgaaatctct
gaggaagagataagaaatgctttggctgatataggtgattttgaaagcataacttggtct
attttccgtgtagaaaatggtattgttatgaagccattgggcattgaagatattgctggt
atatcgtcgcgcttaattgcattacgtgcattagtaaatccgaggatgttaactgcaaat
attgctgaccgttgtgatgtttgtcaagtgaatgaggagaatgttgttagtaaaattcgt
atgccacgaattcgttccaagaagaaagcatttttaaaattggccccctcacaatctttg
agcgcagtgaatccttttgaaactttggaaagagacattaattaa
DBGET
integrated database retrieval system
