Shewanella oneidensis: SO_0314
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Entry
SO_0314 CDS
T00099
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
son
Shewanella oneidensis
Pathway
son00330
Arginine and proline metabolism
son00480
Glutathione metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SO_0314 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SO_0314 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SO_0314 (speF)
Enzymes [BR:
son01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SO_0314 (speF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAN53399
UniProt:
Q8EJZ2
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All DBs
Position
complement(320226..322388)
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AA seq
720 aa
AA seq
DB search
MKSLKVAASLSVRSCFDIDREVVNVLTTDFCDVGAAVVSVDDVKDGIVEKIKNTGLKLPI
FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAIKKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFKEAYLREQIREVAPERADEKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQARYCNHKRFNNAFMMHASTSHFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPSMIDGRQWQDYPTEQMADDLRFFEFEPGQKWHS
FEGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRHAHFPTKVMDPQEANLEFIRGNVELVPLSQIEGRIAAEGALPY
PPGVLCMVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLESTPDGKIQALGYVLNK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattaaaagttgccgcaagcttatctgttagatcttgttttgatatagacaga
gaagttgtcaatgtattaaccactgatttttgcgatgtgggtgcggctgtagtctctgtt
gatgatgttaaagatggtattgttgaaaaaattaaaaataccggattaaaactgcctatt
ttcgtatcagtttgctgcgaagaaaccttcccagatgatatttgttcctcgattaccggg
gtatttgaactctgcggtagcaataccgatttctatggtaagcaggtcgaaaccgctatc
aagaaatatgagcaagctctattaccgcccttctttggcactctgaaaaaatacgtcgaa
atgggtaactccacctttgcctgcccaggccatcagggcggacaattctttcgtaaacat
cccgtaggtcgccaatttttcgatttctttggcgaaaccattttccgctccgacatgtgt
aatgctgacgtaaaactcggtgatctgttaatccacgaaggtgcaccactggatgcacaa
aaatatgcggcaaaagtctttaacgccgataaaacctactttgtgcttaacggcacttcc
tcctcgaataaagtcgccaccaatgcgctgcttgctaaaggtgatttagtattattcgac
cgtaataaccacaaatccaaccaccatggtgcgttaattcaagccggcgcaacaccgatt
tacttagaaaccgcccgtaaccccttcggctttattggcggtatcgacgcccactgcttc
aaagaagcttatttaagggaacaaattcgcgaagttgcaccagaacgtgccgatgaaaaa
cgcccgttccgtttagcgattatccaactcggcacctacgacggcaccatctacaatgct
cgccaagtggttgatcgtattggtcatctatgtgattacatcctgtttgactcggcttgg
gttggctatgaacagtttattcctatgatgaatgactgctcgccactgctgctggaactg
acgcctgaagatcccggtattatcgtgactcaatcagtacataaacagcaggcaggtttc
tcacaaacgtcgcaaatccataaaaaagataaacatatcaaaggccaagcgagatattgc
aaccataaacgtttcaacaatgcctttatgatgcacgcctccaccagccacttctatcca
ctgtttgccgcattagatgtgaacgctaagatgcacgaaggtgccagcggccgttatctg
tggcgtgaagccgtcaaagccgggattgaagcccgtaagttactgcttaaaaaatgtaag
tatatcaagccatttatccccagcatgatcgatggccgccaatggcaggattacccaacc
gagcaaatggccgatgatttgcgcttctttgaatttgaaccaggacaaaaatggcactca
ttcgagggctatgaaaaaggccaatatttcgttgacccttgtaagttcctattaaccaca
ccaggtattgatgccgaaaccggtaaatatactgagtttggtattccagcgactattttg
gctaacttcttacgtgaaaataatattattcccgagaagtgcgacttaaattcgatatta
ttcctaatgacacctgcggaagatatggcaaaaatgcagcacttagtgtcgcaaatatcc
cgcttcgagaaattagtcgatgaagatgcgccattatcggaagtattgccaaacgtctat
aacgccaataaagcccgttataaagactacaccattcgccaactctgccaagaaatgcac
aacctttatgtcagccatgacgtaaaacaactgcaaaaagaaatgttccgccatgctcac
ttcccaaccaaggtgatggacccgcaggaagccaatcttgaatttattcgtggcaatgtc
gaattagtgccactgtcgcaaatcgaaggtcgaattgccgcagaaggcgccctgccatat
ccaccaggggtgttatgtatggtgccaggtgaaatatggggtggcgcagtacaacgttat
ttcttagctctcgaagaaggcatcaacttattacccggattctcccctgaattacaaggt
gtttatctcgaaagcacccctgacggaaaaatccaagccttaggttatgtgttaaataaa
taa
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