KEGG   Shewanella oneidensis: SO_0314
Entry
SO_0314           CDS       T00099                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
son  Shewanella oneidensis
Pathway
son00330  Arginine and proline metabolism
son00480  Glutathione metabolism
son01100  Metabolic pathways
son01110  Biosynthesis of secondary metabolites
son04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:son00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SO_0314 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    SO_0314 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    SO_0314 (speF)
Enzymes [BR:son01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     SO_0314 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: AAN53399
UniProt: Q8EJZ2
LinkDB
Position
complement(320226..322388)
AA seq 720 aa
MKSLKVAASLSVRSCFDIDREVVNVLTTDFCDVGAAVVSVDDVKDGIVEKIKNTGLKLPI
FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAIKKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFKEAYLREQIREVAPERADEKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQARYCNHKRFNNAFMMHASTSHFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPSMIDGRQWQDYPTEQMADDLRFFEFEPGQKWHS
FEGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRHAHFPTKVMDPQEANLEFIRGNVELVPLSQIEGRIAAEGALPY
PPGVLCMVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLESTPDGKIQALGYVLNK
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaatcattaaaagttgccgcaagcttatctgttagatcttgttttgatatagacaga
gaagttgtcaatgtattaaccactgatttttgcgatgtgggtgcggctgtagtctctgtt
gatgatgttaaagatggtattgttgaaaaaattaaaaataccggattaaaactgcctatt
ttcgtatcagtttgctgcgaagaaaccttcccagatgatatttgttcctcgattaccggg
gtatttgaactctgcggtagcaataccgatttctatggtaagcaggtcgaaaccgctatc
aagaaatatgagcaagctctattaccgcccttctttggcactctgaaaaaatacgtcgaa
atgggtaactccacctttgcctgcccaggccatcagggcggacaattctttcgtaaacat
cccgtaggtcgccaatttttcgatttctttggcgaaaccattttccgctccgacatgtgt
aatgctgacgtaaaactcggtgatctgttaatccacgaaggtgcaccactggatgcacaa
aaatatgcggcaaaagtctttaacgccgataaaacctactttgtgcttaacggcacttcc
tcctcgaataaagtcgccaccaatgcgctgcttgctaaaggtgatttagtattattcgac
cgtaataaccacaaatccaaccaccatggtgcgttaattcaagccggcgcaacaccgatt
tacttagaaaccgcccgtaaccccttcggctttattggcggtatcgacgcccactgcttc
aaagaagcttatttaagggaacaaattcgcgaagttgcaccagaacgtgccgatgaaaaa
cgcccgttccgtttagcgattatccaactcggcacctacgacggcaccatctacaatgct
cgccaagtggttgatcgtattggtcatctatgtgattacatcctgtttgactcggcttgg
gttggctatgaacagtttattcctatgatgaatgactgctcgccactgctgctggaactg
acgcctgaagatcccggtattatcgtgactcaatcagtacataaacagcaggcaggtttc
tcacaaacgtcgcaaatccataaaaaagataaacatatcaaaggccaagcgagatattgc
aaccataaacgtttcaacaatgcctttatgatgcacgcctccaccagccacttctatcca
ctgtttgccgcattagatgtgaacgctaagatgcacgaaggtgccagcggccgttatctg
tggcgtgaagccgtcaaagccgggattgaagcccgtaagttactgcttaaaaaatgtaag
tatatcaagccatttatccccagcatgatcgatggccgccaatggcaggattacccaacc
gagcaaatggccgatgatttgcgcttctttgaatttgaaccaggacaaaaatggcactca
ttcgagggctatgaaaaaggccaatatttcgttgacccttgtaagttcctattaaccaca
ccaggtattgatgccgaaaccggtaaatatactgagtttggtattccagcgactattttg
gctaacttcttacgtgaaaataatattattcccgagaagtgcgacttaaattcgatatta
ttcctaatgacacctgcggaagatatggcaaaaatgcagcacttagtgtcgcaaatatcc
cgcttcgagaaattagtcgatgaagatgcgccattatcggaagtattgccaaacgtctat
aacgccaataaagcccgttataaagactacaccattcgccaactctgccaagaaatgcac
aacctttatgtcagccatgacgtaaaacaactgcaaaaagaaatgttccgccatgctcac
ttcccaaccaaggtgatggacccgcaggaagccaatcttgaatttattcgtggcaatgtc
gaattagtgccactgtcgcaaatcgaaggtcgaattgccgcagaaggcgccctgccatat
ccaccaggggtgttatgtatggtgccaggtgaaatatggggtggcgcagtacaacgttat
ttcttagctctcgaagaaggcatcaacttattacccggattctcccctgaattacaaggt
gtttatctcgaaagcacccctgacggaaaaatccaagccttaggttatgtgttaaataaa
taa

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