Shewanella oneidensis: SO_2429
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Entry
SO_2429 CDS
T00099
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
son
Shewanella oneidensis
Pathway
son03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SO_2429 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_2429 (ruvB)
Enzymes [BR:
son01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SO_2429 (ruvB)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SO_2429 (ruvB)
RecFOR pathway proteins
SO_2429 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
AAA_3
AAA_22
AAA_14
nSTAND3
Mg_chelatase
Bac_DnaA
RNA_helicase
AAA_18
NB-ARC
AAA_17
Rad17
AAA_24
DUF815
NTPase_1
TsaE
AAA_25
AAA_19
IstB_IS21
AAA_11
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AAN55463
UniProt:
Q8EEF3
LinkDB
All DBs
Position
complement(2538190..2539194)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVQHDG
AVTQNVAELALNLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATARAYVHFGMIKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagactgatacagccgcagctgcaaggtcaagatgatgttatcgat
agggcaatgcgccctaaattgctcgatgaatacactgggcaggatgatactcgtgctcaa
ttaaaggtattcattcaagcggcgaagaatcgcgaagaagccttagatcatatgttgatc
tacggccctccggggttaggtaaaaccaccttggcgatgattgttgccaatgaaatgggc
gtgaatatcaaatcgacctcgggtcccgtgctggaaaaagcaggggatttagcggcgctg
ctgactaacctcgaagcgggtgatgtgctctttatcgatgaaatccatcggttaagtccg
gtggttgaggagatcctgtatccagcgatggaagactatcaactggatattatgataggt
gaaggaccggcggcgcgttccattaagctcgatttaccaccttttaccttagtgggcgcg
accacgcgcgcaggagcattaacgtctcccttacgggcacgctttggcattccactgcga
cttgagttttataatgtcaaagatctcagcaccattgtgacgcgttctgcccaagtgatg
ggattagcgattgatagtgagggggcaacggaaattgccaaacgctctcgcggtacaccc
agaatcgcaaaccgattacttaggcgggtgcgcgattatgccgaagtgcaacacgatggg
gcggtgactcaaaacgttgctgagctggcgctcaatttgcttgatgttgatggcgaaggc
tttgattatatggaccgcaaattattgttggccattatcgataagtttatgggcggccca
gtgggtcttgataacctcgcagcggcaattggtgaggagcgtgaaaccattgaagatgtg
ctcgaacctttccttattcaacaaggttttatccaacgtactccccgtggtcgaatagcc
acagcgagggcatatgtacattttggtatgataaaaccagagtga
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