Shewanella oneidensis: SO_2629
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Entry
SO_2629 CDS
T00099
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase NADP-dependent Icd
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
son
Shewanella oneidensis
Pathway
son00020
Citrate cycle (TCA cycle)
son00480
Glutathione metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
son01210
2-Oxocarboxylic acid metabolism
son01230
Biosynthesis of amino acids
Module
son_M00009
Citrate cycle (TCA cycle, Krebs cycle)
son_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SO_2629 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SO_2629 (icd)
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SO_2629 (icd)
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Gene cluster
GFIT
Motif
Pfam:
IDH
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
AAN55658
UniProt:
Q8EDW2
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All DBs
Position
complement(2764527..2766752)
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AA seq
741 aa
AA seq
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MKDNSPTIIYTETDEAPALATLSLLPIIKTFTNAADVAVETRDISLSGRVIANFPEKLTD
AQKIGDHLAELGDLANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDE
EKSIKARYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWVKDSKSHVAHMSE
GDFYGSELSVTLSNADTVNIVLAQKDGQEVVLKSGLKLLAGEIIDASVMSKKALVSFFER
EIANAKAENVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIASLPTDVRSQIEADIAAVYAEGPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGKLHDTKALIPDRCYAGVYQETIAFCKEHGAFDPSTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVIDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDANRAHDAQLIVKVKQYLPEHDTSGLDISIMSPEEATRFSLARIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAVQTKDEQLQAHFIPLAHALSANEQVIVAELNNAQGAPVDLGGYYRL
DAVKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcaccaacaattatttataccgaaaccgatgaagcgccagcactggca
acgctttctctgttacctatcatcaaaacctttaccaatgcggcggatgtggcggttgaa
acccgtgacatttctttatctggccgtgtgattgctaacttccctgaaaaactaactgac
gcgcaaaagattggcgatcatttagctgagcttggcgatctggctaatcaacctgaagcc
aatatcatcaagctgcctaatatcagtgcgtcaatcccccagttaaaagcctgtatttta
gagctgcaacagaagggttatgacattccaaactatcctgatgagccaaaaactgacgaa
gaaaagtcaattaaagcgcgttatgacaagatcaaaggcagtgcggtaaacccagtactg
cgtgaaggtaactctgatcgccgcgcgccgctatcagtgaaaaacttcgcgaaaaagaac
ccacactctatgggtaaatgggtgaaagactctaagtcacacgttgctcatatgagcgaa
ggtgatttttacggtagcgagctttctgtgacgctctctaatgctgacactgtcaacatt
gtgctggcacaaaaagacggtcaagaagtcgtccttaaatcaggcctgaaactgctagcg
ggtgaaatcatcgacgcgtcagtgatgagcaaaaaagccttagtcagcttctttgagcgt
gaaatcgccaatgccaaggctgaaaatgtgctgttatcgctgcaccttaaagccaccatg
atgaaagtgtctgatcccatcatgttcggtcatgcagtgaaagtgttcttcaaacctgtg
tttgataaacatgcggcattatttgctgagttaggcgttgatgttaacaacggttttggc
gacgtatatgcgaaaatcgccagcttacctaccgatgtacgcagccaaattgaagccgat
atcgcggcggtctacgctgagggtcctgcgctggcgatggtggattctgacaaaggcatc
accaacttacacgttccaagcgacattattatcgatgcttctatgccagcggctattcgt
tcatctggccaaatgtggggccctgatggcaagttgcacgatactaaagccctgatccct
gaccgttgctacgccggtgtgtatcaagaaactatcgcgttctgtaaagagcacggtgcc
tttgatccaagcactatgggcagtgtgccaaacgtgggtttaatggcacaaaaagccgaa
gaatacggtagccacgataaaaccttcgaaatccctgccgatggcgtagttaacgtgatt
gatgccagtggcaaagtattaatgagtcacaatgtggaagcgggcgacatttggagaatg
tgccaagttaaagacgcgcctatccgtgactgggtcaaacttgccgttcgccgcgcacgt
ttaagcaatacaccagcggtattctggttagatgcaaatcgtgcccacgatgcgcaattg
attgttaaagtgaagcaatatctacctgaacatgacaccagcggtttagacatcagcatt
atgtcgccagaagaagcaacacgtttctctttagcgcgcatcaaagaaggtaaagacacc
atttcagttactggtaacgtactgcgtgactatttgactgacttgttcccaatccttgag
ctgggtaccagtgccaaaatgttatctatcgtgccattaatgaatggtggcggtctgttc
gaaacgggtgcgggtggcagtgcgcctaaacacgtacaacaggttgaaaaagaaggtcac
ttacgttgggattcactcggtgaattcttggcattagccgcctctttggagcatttaagc
caaacagtgggtaaccctaaagcgcaagtactggcggataccttagatcaagccattggt
cagttcttagatagcaacaagtcaccatcaagaagagtcggtgaattggataaccgtggt
agccatttctatctggccatgtattgggcacaggcattagctgttcaaacaaaagacgag
cagctacaagctcactttatcccattagcccacgctttaagcgcaaatgagcaagtgatt
gtggctgagctaaacaatgcgcaaggtgcaccagtggatttaggtggttactatcgttta
gatgctgttaaggctgaaaaagccatgcgcccaagcgaaacgctaaacaagctattgatt
gcttaa
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