Spirosoma oryzicola: LQ777_12245
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Entry
LQ777_12245 CDS
T08981
Symbol
recR
Name
(GenBank) recombination mediator RecR
KO
K06187
recombination protein RecR
Organism
soq
Spirosoma oryzicola
Pathway
soq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQ777_12245 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soq03400
]
LQ777_12245 (recR)
DNA repair and recombination proteins [BR:
soq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LQ777_12245 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LQ777_12245 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
Toprim
RecR_C
HHH_5
HHH
Ras_bdg_2
PHF5
5_3_exonuc
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
UHG89018
LinkDB
All DBs
Position
2897542..2898153
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AA seq
203 aa
AA seq
DB search
MEYPSKLIEDAVNEVAKLPGIGKKTALRLVLHLLKRDEEQTETLAQSLTTMRTQVKYCRK
CHNLSDHELCTICASNKRDQSLICVVEDTRDVLAIENTAQYKGLYHVLGGIISPVEGIGP
SDLQIDSLIARLRGTEGEQVREIILAISPTMEGDTTAFYLQKKLRPFNLKISTIARGVPI
GGDLEYADEVTLGRSILSRIAYD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggagtatccatccaaacttatagaagacgcagtaaatgaggtagcgaaactgccgggt
atcggtaaaaaaaccgccctccggttagtgctccacttactcaaacgggacgaagaacaa
accgaaacgttggcgcaaagtctgacaacgatgcgcacgcaggtcaaatactgccgcaag
tgtcataatctgtcggaccacgagctgtgcacgatttgcgccagcaacaaacgggatcaa
tcgctgatctgcgttgttgaagacacgcgcgacgtgctggccatcgagaacacggctcag
tacaaagggctttatcacgtgctgggagggattatttcacccgtcgaagggatcggcccg
agtgatttacagatcgattcgcttatcgcacgattgcggggtacggaaggcgaacaggtt
cgggaaatcattctggctatcagcccaaccatggaaggtgatacaacggcgttttaccta
cagaaaaagctccggccgttcaaccttaagatctcgaccattgcccgaggggtgcctatc
ggcggtgatcttgagtacgccgatgaggttacgttaggacgaagtattttaagccgtatc
gcttacgattaa
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