Solanum tuberosum (potato): 102587218
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Entry
102587218 CDS
T02981
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
sot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102587218
03450 Non-homologous end-joining
102587218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
102587218
03400 DNA repair and recombination proteins [BR:
sot03400
]
102587218
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
102587218
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
102587218
BRCA1-C complex
102587218
NHEJ (non-homologous end-joining)
MRX complex
102587218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
SPG48
Motif
Other DBs
NCBI-GeneID:
102587218
NCBI-ProteinID:
XP_006341147
LinkDB
All DBs
Position
Un
AA seq
730 aa
AA seq
DB search
MDDTSRDEGSNTIRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQVDFVLLGGD
LFHENKPSRATLVKAIEILRRYCLNDQPVQFQVVSDQTVNFANLFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALHPILIRKGLTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEAREGCQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKGN
QYRPTKIPLNSVRPFEYTEVVLKDEPDIDPNDHSSILEHLDKVVKKLIERSSQKANNGSV
VKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKKFGKEAKFDDSERLR
PEELNQQNIEALVAESNLKMEVLPVSDLDVALHNFVNKDEKMAFYSCVQYNLEETRSKIA
RDSDPVKFEEYDIILKVGECLEERVKQRTERNKDDQPFSFSGQSLEDIRGKSTGVGSAVS
FSDDEDASMLSASKSTAGKGKKESSQSFRSSREVSEVGKTSSRGRGRGRGRASNSLKQTT
LDASLGFRQSQRSASIAASASVRSIAADDENVESPSSDEDAKQDTNVIDESSDDDKTVQA
KGRKRAAPRGRGRGSATAAKRGRKPDSSSSSLQRMLMDVNIDDDDDDDDMTKKEKRPQPR
ATRNYGALRW
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacttcaagggatgaggggagcaacaccattaggatcctggttgctacggac
tgtcacttgggctatatggagaaggatgaagtacgtaggcatgattcatttcaggcattt
gaagagatatgttcaatcgcggagaaaaaacaggtggactttgtgcttctcggtggtgat
ctgtttcatgagaataagccatccagagcaacactggtaaaagccattgagattcttcgc
cgctattgtctcaatgatcaaccggtgcaattccaagttgttagtgaccagacagtgaac
tttgctaacctatttggtcatgtaaattatgaagatcctcactttaatgtggggttgcct
gttttcagcattcatggcaatcacgatgatccagctggtgtggacaacctatctgcagtt
gacatcctttcggcatgcaatcttgtcaactattttggtaaaatggatctcggtggttct
ggtgttggacagatcgctctgcaccctattcttatcaggaagggtttaacatcagttgct
ctttatggtcttgggaatatcagagatgaacggttgaatagaatgtttcaaacaccacat
gctgtgcaatggatgcgacctgaggctcgggaagggtgtcaagtatcagactggttcaac
attttggtacttcaccaaaatagagtaaagacaaatccaaaaaatgcaataaatgagcat
ttcctgcctcggtttctggattttattgtgtggggtcacgaacatgaatgtttagtggat
cctcaggaggttccaggtatgggttttcacattactcagccaggttcatctgttgcgaca
tcactgattgagggcgaatcaaaacaaaaacatgtacttttattagaaattaagggaaat
caatatcgtccaacaaagatacctctgaactcagtgcgtccttttgaatatactgaggtt
gtgctgaaggatgaacctgatattgatcctaatgatcacagttcgattcttgaacatttg
gataaagtagtcaaaaagttgatagaaagatctagtcaaaaggctaataatggatctgtt
gtaaagctccctttagttcgagtaaaggtagactactctgggtttatgactataaatcct
caaaggttcggacaaaaatatgtggggaaggttgccaatccacaggatattctcatattc
tcaaaatcttcaaaaaagtttggcaaggaagctaaatttgatgattctgagcggcttcgc
cctgaagaattgaatcagcaaaacattgaagctttagttgctgagagcaatttgaaaatg
gaggtacttccagtgagtgatctggacgttgccctgcacaattttgttaacaaggatgag
aaaatggctttttattcttgtgtacaatacaaccttgaggaaactcgaagcaaaatagct
cgtgattcagatccggtgaaattcgaagaatatgatataattttaaaagttggagagtgc
ttagaggaacgcgtcaaacaaagaactgaaagaaataaagatgatcaacctttctccttt
agtggacagtctttggaggatattagaggcaaaagtactggagtaggatctgcagtttca
ttcagtgatgatgaggatgcctctatgctctccgcctcaaagtctactgctggaaaagga
aagaaagagtcatctcaatcttttagatcctctcgtgaagtttctgaagttggcaagacc
tcttcaaggggtaggggtagaggcagaggaagggcttccaatagcttgaagcagacaacc
cttgatgcatctctgggattccgtcagtcacagagatctgcatcaattgccgcatctgcg
tcagtgcgaagtattgccgcagatgatgagaatgtggaatctccttcaagtgatgaagat
gccaaacaggacactaacgttattgacgaaagctcagatgatgataagacagttcaggcc
aaaggacgcaaaagggctgctccaaggggaaggggtagaggttcagcaacagcggctaaa
aggggaagaaaaccagatagctcctcatcttcacttcaaaggatgctcatggatgttaat
atagatgacgatgatgatgatgatgacatgacaaagaaagagaaaagacctcaacctcgg
gcaactaggaattatggtgctttaaggtggtga
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