Solanum tuberosum (potato): 102591640
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Entry
102591640 CDS
T02981
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
sot03015
mRNA surveillance pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102591640
09122 Translation
03013 Nucleocytoplasmic transport
102591640
03015 mRNA surveillance pathway
102591640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102591640
03041 Spliceosome [BR:
sot03041
]
102591640
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102591640
TREX complex
102591640
Spliceosome [BR:
sot03041
]
Complex C
Other components
EJC/TREX
102591640
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102591640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
DUF5320
Motif
Other DBs
NCBI-GeneID:
102591640
NCBI-ProteinID:
XP_015158895
LinkDB
All DBs
Position
Un
AA seq
251 aa
AA seq
DB search
MAEAALDMTLDDLIKKNKTGTGGKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTAKA
PEASWNHDMFAADQAVAFGQAGGRASSIETGTKLYISNLDYGVSKEDIKELFSEIGDLKR
YAVHYDRSGRSKGTTEVVFSRRQDTLAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSN
GAFGFGDTNGAPRSGQVRGGGFGRSRGARGRGRGFRGGNRGWGRGGRGEKVSAEDLDADL
MKYHTEAMQTN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcagctttggatatgactctcgacgatctcatcaagaagaataagaccggt
accggaggtaaacctcgtggcagaggctgcggcgccgcctccacctccagtgctggacct
tcgagacggttccctaatcgttctgctaaccgagctgcaccttattccaccgccaaggcc
cctgaagcgtcgtggaatcatgatatgttcgcggcagatcaagccgtcgcctttggtcaa
gctggtggtcgggcgtcttccatagagactgggactaaactctacatctccaatcttgat
tacggcgtctccaaagaggatatcaaggagctcttttcagaaattggtgacctaaaacgt
tatgctgttcattatgataggagcgggagatcaaagggaacgacagaggtggttttctca
cgtagacaagatacactagctggtgttaaaaggttcaacaatgttcagcttgatgggaag
ccaatgaagattgaaattgttggaactaacattgtcactcctactgcccctttttccaat
ggtgcttttggttttggagatactaatggagctcctagaagtggtcaagtaagaggtggt
ggttttgggaggtcacggggtgccagaggacgtggtcgtggatttcgaggaggcaacaga
ggatggggaagaggaggtcgtggagaaaaggtatctgcagaagatctagatgctgatttg
atgaaatatcatacagaagcaatgcagacgaactga
DBGET
integrated database retrieval system