Solanum tuberosum (potato): 102599967
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Entry
102599967 CDS
T02981
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102599967
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102599967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Apolipo_F
AAA_27
Motif
Other DBs
NCBI-GeneID:
102599967
NCBI-ProteinID:
XP_006358345
LinkDB
All DBs
Position
Un
AA seq
792 aa
AA seq
DB search
MEEDAGERSNFVVGFIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYEPM
VIIVSPNKLAADGMVGVSQLADRVCSSTKKVIMARGCFDDTRGAVLVKGLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWIEAEKGVIITNHSLLVTFNGSFDHMNIDSTSVQNLEIIEP
MHSSLLGTNNKKRSLFHMLKTTRTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKPKRVTNEVLASDNGRRSQIMISSIILLKTALDAI
PLLSKVLKEAKSCLLGNVYKTICENEKYTSIRKRIGEVIDEDVLHTRVPFVARTQQCFAV
KAGADGLLDMARRSFCDTSEAIHSLANKYRQDFKLPNLKIPFNNRQGFYFSIPQKDIQGK
LPSKFIQVVKHGNNVHCSSLELASLNVRNKSAAKECWLRTAFCLEALMDAIREDVSVLTV
LAEVLCLLDMMVNSFAHTISTKPVDRYTRARFTCDGPLAIDSGRHPILESIHNDFIPNGI
FLSEASNMAIVMGPNMSGKSTYLQQVCLMIILAQIGCYIPARFATLRVVDRIFTRMGTMD
SLESNSSTFMTEMKETAFIMQNVSHRSLIVMDELGRATSSSDGFAIAWSCCEHLLALKAY
SIFATHMENLSALSTMYPNVKTLHFDVDVRNNRMDFKFQLKDGSRHVPHYGLMLAGVAGL
PSSVVETAKRITSRITEKEMKRMEVNCRQYEDVQLIYRVAQRLMCLKYSDQDEDSLREAL
QNLKESYIGGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgccggagaaagatcaaacttcgtcgtcgggttcatagagaaccgagcc
aaggaggttggagtagctgcgtttgatttgagatcagcgtcactgcatctttctcagtat
atagagactagcagctcctatcaaaatacaaagactttactacagttctatgaacctatg
gtgatcattgtttcccccaataaactggcggcggatggaatggttggagtctcacaactg
gctgacagagtttgttcctccacaaaaaaggttataatggcccgtggttgctttgatgat
accaggggagctgtactggttaaaggtttagctgctaaggaaccgtctgctcttggactg
gattcatactacaagcaatactatttgtgcttggctgcagcagctgcaactatcaagtgg
atcgaagcagagaaaggtgttattataacaaatcactctttgctggttacttttaatgga
tcttttgaccacatgaacattgattccaccagtgttcagaacttggagataattgagcct
atgcactcttctcttctgggcacaaacaacaaaaagagaagtttattccacatgcttaaa
acaactcgaactattggagggactagacttctgagggcaaatcttttgcagcctctgaaa
gacatagagacaattaacactcgactcgattgcctggatgagttgatgagcaatgaacag
ctattctttggtttgtctcaggcccttcgtaagtttccgaaagaaacagatagggtcctt
tgtcacttctgcttcaagccaaagagagttactaatgaagtcttggcttcggataatgga
agaaggagccagataatgatatccagcattattcttctcaaaacagctcttgatgctata
ccgttactctccaaggttcttaaagaagccaagagttgtctgcttggaaatgtgtacaaa
accatatgtgagaatgaaaaatatacttcaataaggaaaagaattggagaggtgattgac
gaagatgtccttcatacaagagttccttttgttgcacggacacagcagtgttttgctgtt
aaggctggagcagatgggcttcttgatatggctcggcggtcattctgtgacaccagcgaa
gctatacacagtctcgcaaataagtatcgtcaagatttcaaactgccgaacttgaagatc
ccattcaataataggcaagggttttactttagcattccacagaaggacatacagggaaaa
ctgcccagcaagttcatccaggtcgtgaaacatggaaacaatgtccattgctcgagtctt
gagcttgcttcattgaatgtgaggaacaagtctgcagctaaagaatgctggttgaggact
gcattttgtcttgaagcattaatggatgcaatacgagaggatgtctctgtgcttactgtt
cttgcagaagtgttgtgccttttagacatgatggtaaattcatttgctcacactatatca
acaaaaccagttgatagatatactagagctcgttttacatgtgatggcccattggcaatt
gattctggacggcaccccattctggaaagcatacacaatgatttcattccaaatggcatt
tttctttctgaagcatcaaatatggctattgtaatgggcccaaacatgagcggaaaaagt
acttatcttcagcaagtttgtttaatgatcatccttgctcaaattggttgctatattcct
gctcgatttgccactttgagggtggtcgatcgtattttcacaaggatgggaacaatggac
agtctcgaatcaaactctagcacgttcatgacagagatgaaggagacggcttttatcatg
caaaacgtgtcccatagaagtctgattgttatggatgaattggggagggcaacttcatcc
tctgatggattcgcaatcgcgtggagctgttgtgagcatctattggcacttaaagcgtac
tcaatatttgctactcatatggaaaatctatcagcgctatccaccatgtatccaaatgta
aaaactcttcattttgatgttgatgtgaggaataaccgcatggacttcaagtttcaactg
aaggatgggtcacgtcatgtgccacattatggcctcatgctagcaggggtagctggatta
ccaagttcagtagtggagactgccaaaagaatcacatctaggatcacagagaaggaaatg
aagagaatggaggtgaattgcagacagtacgaggacgtacaattgatttaccgtgtagct
caacggctgatgtgcttgaaatattctgatcaggatgaagattctctaagggaggctctg
cagaaccttaaggaaagctatattggtggaaggctttag
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