Solanum tuberosum (potato): 102603887
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Entry
102603887 CDS
T02981
Name
(RefSeq) DNA ligase 1
Organism
sot
Solanum tuberosum (potato)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
102603887
NCBI-ProteinID:
XP_006357803
LinkDB
All DBs
Position
Un
AA seq
1441 aa
AA seq
DB search
MSSAAGTLTLDSITLYITALNSLSDKSSSNSIPLSLPLSPIPSSIPQPKLIPRTRFIIDG
FKYAADFSVSYFLSHFHSDHYTGLSSNWSKGIIFCSSTTANLLIQVLNVPAQYVVSLPLS
EAVLIDGSEVYLIDANHCPGAVQFLFKVPVSDGKFERYVHTGDFRYCDDMKLEPVLNAFV
GADAVFLDTTYCHPKFIFPSQQESIDYIVGVIEKSGAENEGSLKNILFLIATYVIGKEKI
LIEVSRRCQRKIHVDGRKMSVLGVLGHGEDGVFTTVESETDVHVVGWNVLGETWPYFRPN
FEKMDKIMNEKGYSKVVGFVPTGWTYEVKRNKFSVRKKDSFEIHLVPYSEHSNYDELREY
VKFLKPKHVIPTVGTDVEKLDSKHANAMRKHFAGLVDEMAIKQEFLMGFHRSVQGKEDVD
AKASGLALVSITEQENTNRSAHTLVSIIKQKNEDTSSDSISCNAADMNTVIHSSFPQGES
VSPGLEKISEGDMEEILEELQGCLPTWVTKGQMLDLLSISDKNVVDAVSYFYEHETEYRE
QVTASNSVTSSFEANSANESALPSKPCLGKTPQQGETTASSKTVKLPIMDSSSSKKVSPG
KRKRSTGNKSSSSSKKVSPGNRKRSTGNKSFEKAKGHASMDSGGPKQCTITKFFSKTLPL
SLQNGNSKADSKNFHDDNCMPPNASIEAYKEEADRFIQIMNGDDSLRSYATTVLAKTKGD
ISMALDIYFSEYKDVGETNGDGISKTNKLLQPQCAKEVYPSSKDDKLPKILGDDDADLSL
CGVPFADNAVNYVSLPHEKYSPVEHACWSKGQAAPYIHLARTFELVKEEKGKIKATSMLC
NMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGGSTVVAALEEACGTKKSKVRELY
NSLGDLGDVAQLCRQTQSLLAPPVALTVRGVYSALRRISLQAGSGSAIRKKSLIVNLMCS
CREKEMKFLVRTLVRNLRIGAMMRTVLPALAQAVVFNSTPYEGLVENLKDCLQRLSAEVV
EAYNILPSLDVLVPSLMEKGIEFSSNTLSMAPGIPIKPMLAKITNGVPQVMKLFHNKAFT
CEYKYDGQRAQIHKLSDGSVRVFSRNGDETTSRFPDLVNIITESCDSRGATFILDAEVVA
IDRQNGPKLMSFQELSSRERGSKDSIIALDKIKVEICIFVFDIMFANGEQLLNLPLRQRR
KYLKDLFGDGKVGYLEYATEMTVECDDACADDEATLARMNSFLNAALHASCEGIMVKSLD
EDAGYTPSKRSDAWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTE
EFQSVCRVMSGFSDSFYVEMRDFFDADKICQKKPPYYRSEEVPDMWFSPEVVWVIRGADF
TVSPVHHAAIGLVHPSRGISVRFPRFIRCVSDRKPEECSTSADIADMFRSQIRKMDVKAE
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccgccggaaccctaaccctcgactcaatcactctgtacataaccgctctc
aactccctctccgacaaatcctcatcaaattcaatcccattatccctccctctctcccca
atcccttcttcaatccctcaaccgaaactcatcccaagaactcgttttatcatagacggt
ttcaaatatgccgccgatttctccgtttcttacttcctctcccattttcactccgatcac
tatactggcctgtcctctaattggtctaaaggtatcatattctgttcctccaccactgct
aaccttctcatccaagttctcaatgttcccgcgcaatatgtagtgtctttaccgctttcc
gaagcggttttaattgacggttctgaagtttatctcatcgatgccaatcattgtcctggt
gctgtgcaattcttatttaaagttccagttagtgatggaaagtttgagcggtacgttcac
acaggtgattttcgttattgtgatgacatgaaattagagcctgtattgaatgcatttgtg
ggtgctgatgctgtatttttggatacaacttattgtcatccgaaatttatattccctagt
caacaggaatcaattgattatatagttggagttatagagaaaagtggagctgagaatgag
ggttcattgaaaaatatcttgtttcttattgctacttatgttattgggaaagagaagatt
ttaatagaggtttcgcggaggtgtcagagaaagatccacgttgatggcagaaaaatgtcg
gttttaggagtattaggtcatggggaggatggggtgtttacgactgttgaatctgaaact
gatgttcatgttgttgggtggaatgtattgggtgagacttggccatatttcagacctaat
tttgagaaaatggataagatcatgaatgagaaaggatattccaaggtggttggttttgtc
cccacaggttggacttacgaagtgaagcggaataagttttcagtgagaaagaaagattcc
tttgagatacatcttgttccgtatagtgaacattcaaattatgacgagcttagagaatat
gttaagtttttgaaaccaaagcatgtcatcccaacagtaggtacagatgttgagaagctg
gatagcaaacatgcaaatgccatgcggaagcattttgctggcttggttgatgagatggcc
atcaagcaagaattcttaatgggttttcatcgttctgtccaagggaaggaggatgtagat
gcaaaagcatcgggtcttgctttagttagtatcaccgagcaagaaaacacaaacagatct
gctcatactttagtcagtatcatcaagcaaaaaaatgaggatacttcatcagattctata
agctgcaatgctgctgatatgaatactgttatccattcctcatttcctcaaggagaatct
gtgtcgccaggtttagaaaaaataagtgaaggtgatatggaggaaatactagaagaactt
caaggctgtttgcccacttgggtaactaaaggtcagatgttggatttacttagtatttcg
gataaaaatgttgttgatgcagtctcatacttttacgaacatgaaacagaatatcgtgaa
caggtcactgccagtaattctgttacctcttcttttgaggcaaactcagcaaatgagtct
gcattaccttccaaaccatgtcttggtaaaaccccgcagcagggtgagacaactgcatca
agtaaaactgttaaactacccatcatggacagttccagtagcaaaaaagtttctcctggt
aaaaggaagagaagtactggaaacaagtccagttccagtagcaaaaaagtttctcctggt
aacaggaagagaagtactggaaacaagtcatttgagaaagcaaaaggacatgcgagtatg
gattctggtggaccaaagcaatgtactataacaaagttcttcagtaaaacgcttcctctt
tctttgcagaatggaaacagtaaagctgatagtaaaaatttccatgatgataactgcatg
ccaccaaatgcctctattgaggcttataaagaggaagctgatcggtttattcagattatg
aatggggatgactctttgagaagttatgctaccacagtactagcgaagactaaaggagac
ataagtatggcacttgatatttatttttcagaatacaaagatgtaggagagactaatgga
gatgggatttctaaaacaaacaaattgttgcaacctcagtgtgctaaagaggtttaccct
tcttccaaagatgataaattacccaaaatattaggagatgatgatgccgatttgtcgtta
tgtggtgttccctttgctgataatgctgtaaattatgtatcacttccccatgagaaatac
tctcccgtggagcatgcttgctggagtaaggggcaggctgctccatacatacatcttgca
cgaacttttgaattggtaaaggaagaaaaagggaagataaaagcaacatcaatgttgtgc
aatatgtttcggagcttgctagccttgtctccggaggatgtgcttcctgcagtgtacttg
tgcacaaacaagatagcccctgatcatgaaaatatggaattgaacattgggggtagtact
gttgtagcagcactagaggaggcatgcgggacaaagaaatcaaaagtacgagaactatac
aacagtctcggtgatcttggtgatgttgctcaactttgccgacaaacacaatcattactt
gctcctccagtggcacttacagttaggggtgtatactctgctcttagaaggataagcttg
caagcaggtagtgggagcgccatccgaaagaaaagcctgattgtcaatctcatgtgttca
tgtagagagaaggagatgaagtttcttgtgagaactttggttcggaatttgcgcattgga
gccatgatgagaactgttcttcctgcattagctcaagcagttgtgttcaattctactcct
tatgaaggactggtcgaaaacctgaaagattgtctgcagcgtctttcagcagaagtagta
gaagcgtataacatccttcccagcttggatgtacttgttccttccttgatggagaagggg
attgagttttcttcaaatacattgtcaatggctccaggcatacccatcaaaccaatgctt
gcaaagattactaatggggtccctcaagtgatgaaactctttcacaacaaagcctttaca
tgtgaatacaaatatgatggtcagcgagctcaaattcataaactgtctgatggttcagtc
cgtgtattttcaaggaatggggatgaaacaacatctagatttccggatttggtcaacata
attacagaatcatgtgattccagaggagcaacatttatcttggatgcagaggttgttgca
attgatagacaaaatggtccaaagctcatgtcgttccaagaactatcttcacgtgagagg
gggtccaaagattccatcattgcgttagataaaattaaggttgagatatgcatttttgtt
ttcgatatcatgtttgcaaacggagaacaattgttgaatctgccgctccgtcaaaggcga
aaatatttgaaggatttatttggtgacggcaaagtaggttatttagagtacgcgacagaa
atgactgtagagtgcgatgatgcttgtgcagatgatgaagccacactggctaggatgaac
agctttcttaatgctgcactacatgcttcatgtgaagggatcatggtgaagtctcttgat
gaagatgctgggtacacaccatcaaagcgctctgatgcatggttaaaggtcaagagagac
tatgttgaaggattaaatgattccctggacttggttccaattggtgcttggcatgggaat
ggaagaaaagcaggatggtatagtcctttccttatggcctgctacaaccctgacacagag
gaatttcagagtgtctgccgggtcatgtctgggttttctgattccttctatgtagagatg
agagacttcttcgatgcggacaagatctgccagaaaaagccaccctactaccgaagtgaa
gaagttccggatatgtggttttctccagaagttgtgtgggtgataaggggtgctgacttc
acagtgtcaccagtgcatcacgcagccattggtttagtccatccatctcgtggtatttct
gtcagattccccagattcatacggtgtgtgtcagatagaaaacctgaggaatgtagcaca
tctgctgatatagctgacatgttccgctctcagattagaaaaatggatgtgaaggctgaa
aaatag
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