Solanum tuberosum (potato): 107060415
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Entry
107060415 CDS
T02981
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107060415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
107060415
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107060415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-GeneID:
107060415
NCBI-ProteinID:
XP_015163839
LinkDB
All DBs
Position
Un
AA seq
676 aa
AA seq
DB search
MEPSGGDERNVENNGQRKFSPGTRESFTNQPFVEEVSDDGADSSEEESDGDVVLISEEEE
EENGPNVVREEEEEEDEEKKEDEEESDPDVIIREEKEEESDHDVVIIKEEEEDEESDPDV
VIIRENEEEDESDPNVVIIREEEEEESDPDVVIIREEEEEEESDPDEEESDPDVVVIREK
PAPMLNVTYEVVPSTSSMFRAAIESKEFTDTTSCSESEFRSSTDALRKNRKKILEESEFL
KFIVKSIKNVNDHNKVTPPEKKEHVFVKETLPLILGFEDQEPLPLEKEEWEKEIDNLFVE
MNMCIEELHIGFTNPSVSPMQSGQLSDCQMENHHLVLDEQIGLICSVCPYVHLESKYICP
PFAQRTRGRYERKYFEESPSLLDVHGFRVSDFYGEGTVWDLVHQIAKATMYFHQCEGFEF
MWNNIAGDITLERLREPLFVSKGGCIISHPPGTGKTRLTIVFLQSFLKLFPQCRPVIIAP
SNLLLKWEAEFQKWAVDIPFHNLNNKDFSLKEDEGTVGVFNCLSHAVKKNPHLKRMVKLQ
SWAKSQSVLGISYDLFRILTGEDGEGYAKETREILLKSPGLLVLEEGLNGWNEQSLVWKA
LRKVETEKRILLSGTPFKNNIKDLYNTLCVVSPKFAADFKQKWTSLSSSIDKNARALEEI
RDIISPLVHEFTLCGI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagccttccggaggtgacgagagaaatgtggaaaacaatgggcagagaaagttcagt
ccaggaactcgtgagtccttcacgaatcaacctttcgttgaagaagtatctgatgatggt
gcagattcgtcggaggaggagagtgatggtgatgttgttctcattagcgaggaggaggag
gaggaaaatggtcctaatgttgttagggaggaggaggaggaggaggatgaggagaagaag
gaggatgaggaggagagtgatcctgatgttatcattagggaggaaaaggaggaggagagt
gatcatgatgttgttatcattaaggaggaggaggaggacgaggagagtgatcctgatgtt
gttatcattagggagaatgaggaggaggatgagagtgatcctaatgttgttatcattagg
gaggaggaggaggaggagagtgatcctgatgttgttatcattagggaggaggaagaggag
gaggagagtgatcctgatgaggaggagagtgatcctgatgttgttgtcattagggagaag
cctgctccgatgttgaatgtaacatatgaggttgttccttctacttcaagcatgtttagg
gcggcaatcgaatccaaagagtttactgatacaacctcatgttccgagtcagaattcaga
tcttcaactgatgctcttcgaaagaatcgaaagaagattcttgaagagtctgagtttctg
aagtttattgttaaatcaataaaaaatgtcaatgatcataataaagtcactcctcctgaa
aagaaggaacatgtttttgtcaaagaaacacttcctttaatactcggatttgaagaccag
gaacctcttcctctggagaaagaagaatgggaaaaggagattgacaatctttttgttgaa
atgaacatgtgtatcgaagaattacatattggctttacaaatccatctgtttcgccgatg
cagagtggacaactaagtgattgtcagatggagaaccaccatcttgttctagatgaacaa
attggactcatctgttcagtttgtccatatgtccatttggagagcaagtacatctgccct
ccttttgctcagagaactcgagggaggtacgaaagaaaatattttgaagagtcgccatca
ctcttggatgttcatggcttcagagtttctgatttttatggagaaggaaccgtgtgggat
ttagttcaccaaattgccaaagcgacaatgtattttcatcaatgtgaaggatttgagttc
atgtggaacaacattgctggagatataactcttgagaggctgagagagcccctatttgtg
agtaagggaggatgcattatctcacacccaccaggcaccggaaaaacccgactcaccata
gtgtttcttcagtcatttctgaagttgttcccacagtgtcggcctgtaatcatagctcca
tccaatttgcttcttaaatgggaagccgagttccagaaatgggcggtggacattcccttc
cacaacttgaacaacaaggacttctctttaaaggaagatgaaggtactgttggtgtcttt
aactgtttatcccatgctgtgaaaaaaaatccacaccttaaacgcatggtgaagctgcaa
tcttgggcgaaaagtcagagtgttttgggaatcagttatgacttgttcagaattctcaca
ggagaagatggagagggttatgccaaagagactagagaaatacttctaaaatctcctggt
cttctggtccttgaagaagggctgaatggttggaatgagcagagtcttgtgtggaaagct
ttgagaaaggttgaaacagagaagcgcatacttttgtctggaactccattcaagaataac
atcaaagacctgtacaacactctctgtgtagttagtccaaagtttgctgctgattttaag
cagaaatggacttctcttagcagttccattgacaagaatgctcgagcgttggaagagatt
agggatattatttcacctcttgtccatgaattcaccttgtgtggtatctaa
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